Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC20.67■□□□□ 0.9
NUP98P52948 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.67■□□□□ 0.9
NUP98P52948 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUP98P52948 SLC7A15P-201ENST00000424028 1363 ntBASIC20.67■□□□□ 0.9
NUP98P52948 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC20.67■□□□□ 0.9
NUP98P52948 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
NUP98P52948 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUP98P52948 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUP98P52948 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUP98P52948 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NUP98P52948 AL603756.1-201ENST00000606511 2163 ntBASIC20.67■□□□□ 0.9
NUP98P52948 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
NUP98P52948 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUP98P52948 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
NUP98P52948 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUP98P52948 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC20.67■□□□□ 0.9
NUP98P52948 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NUP98P52948 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NUP98P52948 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
NUP98P52948 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
NUP98P52948 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NUP98P52948 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUP98P52948 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC20.67■□□□□ 0.9
NUP98P52948 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.67■□□□□ 0.9
NUP98P52948 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
NUP98P52948 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC20.67■□□□□ 0.9
NUP98P52948 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
NUP98P52948 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC20.67■□□□□ 0.9
NUP98P52948 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC20.67■□□□□ 0.9
NUP98P52948 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC20.67■□□□□ 0.9
NUP98P52948 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUP98P52948 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NUP98P52948 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
NUP98P52948 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NUP98P52948 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
NUP98P52948 AL512652.2-201ENST00000625156 1716 ntBASIC20.66■□□□□ 0.9
NUP98P52948 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUP98P52948 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.66■□□□□ 0.9
NUP98P52948 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUP98P52948 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUP98P52948 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.66■□□□□ 0.9
NUP98P52948 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NUP98P52948 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
NUP98P52948 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUP98P52948 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
NUP98P52948 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NUP98P52948 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUP98P52948 AL358472.5-202ENST00000641448 1267 ntBASIC20.66■□□□□ 0.9
NUP98P52948 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUP98P52948 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
NUP98P52948 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUP98P52948 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.66■□□□□ 0.9
NUP98P52948 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC20.66■□□□□ 0.9
NUP98P52948 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC20.65■□□□□ 0.9
NUP98P52948 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC20.65■□□□□ 0.9
NUP98P52948 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.65■□□□□ 0.9
NUP98P52948 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUP98P52948 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUP98P52948 CU639417.3-201ENST00000624240 1404 ntBASIC20.65■□□□□ 0.9
NUP98P52948 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUP98P52948 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUP98P52948 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUP98P52948 OR8S1-201ENST00000310194 1080 ntBASIC20.65■□□□□ 0.9
NUP98P52948 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NUP98P52948 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC20.65■□□□□ 0.9
NUP98P52948 MAX-210ENST00000555419 765 ntTSL 5 BASIC20.65■□□□□ 0.9
NUP98P52948 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC20.65■□□□□ 0.9
NUP98P52948 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NUP98P52948 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUP98P52948 AMT-206ENST00000458307 1860 ntTSL 2 BASIC20.65■□□□□ 0.9
NUP98P52948 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUP98P52948 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUP98P52948 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUP98P52948 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.65■□□□□ 0.9
NUP98P52948 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.65■□□□□ 0.9
NUP98P52948 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUP98P52948 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUP98P52948 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUP98P52948 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUP98P52948 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.65■□□□□ 0.9
NUP98P52948 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUP98P52948 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NUP98P52948 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUP98P52948 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
NUP98P52948 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC20.65■□□□□ 0.9
NUP98P52948 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NUP98P52948 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC20.64■□□□□ 0.9
NUP98P52948 RASL12-203ENST00000434605 982 ntTSL 2 BASIC20.64■□□□□ 0.9
NUP98P52948 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC20.64■□□□□ 0.9
NUP98P52948 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC20.64■□□□□ 0.9
NUP98P52948 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC20.64■□□□□ 0.9
NUP98P52948 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
NUP98P52948 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC20.64■□□□□ 0.9
NUP98P52948 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC20.64■□□□□ 0.9
NUP98P52948 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.9
NUP98P52948 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC20.64■□□□□ 0.9
NUP98P52948 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.64■□□□□ 0.9
NUP98P52948 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
NUP98P52948 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC20.64■□□□□ 0.9
NUP98P52948 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms