Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL15A1P39059 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC21.14■□□□□ 0.98
COL15A1P39059 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL15A1P39059 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC21.14■□□□□ 0.98
COL15A1P39059 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC21.14■□□□□ 0.98
COL15A1P39059 REEP4-207ENST00000523293 913 ntTSL 3 BASIC21.14■□□□□ 0.98
COL15A1P39059 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC21.14■□□□□ 0.98
COL15A1P39059 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
COL15A1P39059 AL844908.2-201ENST00000609461 460 ntBASIC21.14■□□□□ 0.98
COL15A1P39059 AC008738.7-201ENST00000609744 511 ntBASIC21.14■□□□□ 0.98
COL15A1P39059 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
COL15A1P39059 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC21.14■□□□□ 0.97
COL15A1P39059 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL15A1P39059 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL15A1P39059 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC21.14■□□□□ 0.97
COL15A1P39059 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COL15A1P39059 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC21.14■□□□□ 0.97
COL15A1P39059 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COL15A1P39059 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC21.14■□□□□ 0.97
COL15A1P39059 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL15A1P39059 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC21.14■□□□□ 0.97
COL15A1P39059 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL15A1P39059 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL15A1P39059 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
COL15A1P39059 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.14■□□□□ 0.97
COL15A1P39059 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL15A1P39059 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL15A1P39059 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL15A1P39059 AL645608.8-201ENST00000606034 2086 ntBASIC21.13■□□□□ 0.97
COL15A1P39059 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
COL15A1P39059 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
COL15A1P39059 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC21.13■□□□□ 0.97
COL15A1P39059 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL15A1P39059 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL15A1P39059 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC21.13■□□□□ 0.97
COL15A1P39059 BANF1P1-201ENST00000553684 263 ntBASIC21.13■□□□□ 0.97
COL15A1P39059 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
COL15A1P39059 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL15A1P39059 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL15A1P39059 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
COL15A1P39059 AL035456.1-201ENST00000456064 1369 ntBASIC21.13■□□□□ 0.97
COL15A1P39059 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL15A1P39059 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL15A1P39059 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
COL15A1P39059 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
COL15A1P39059 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
COL15A1P39059 AC139713.2-201ENST00000641328 2723 ntBASIC21.12■□□□□ 0.97
COL15A1P39059 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL15A1P39059 FAM220BP-201ENST00000377689 816 ntBASIC21.12■□□□□ 0.97
COL15A1P39059 AL353705.2-201ENST00000428243 662 ntBASIC21.12■□□□□ 0.97
COL15A1P39059 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL15A1P39059 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL15A1P39059 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC21.12■□□□□ 0.97
COL15A1P39059 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC21.12■□□□□ 0.97
COL15A1P39059 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC21.12■□□□□ 0.97
COL15A1P39059 STOM-203ENST00000538954 1257 ntTSL 5 BASIC21.12■□□□□ 0.97
COL15A1P39059 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC21.12■□□□□ 0.97
COL15A1P39059 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC21.12■□□□□ 0.97
COL15A1P39059 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL15A1P39059 LETM1P2-201ENST00000597330 2178 ntBASIC21.12■□□□□ 0.97
COL15A1P39059 RAB34-223ENST00000636154 730 ntTSL 2 BASIC21.12■□□□□ 0.97
COL15A1P39059 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL15A1P39059 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL15A1P39059 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL15A1P39059 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL15A1P39059 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL15A1P39059 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL15A1P39059 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.12■□□□□ 0.97
COL15A1P39059 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL15A1P39059 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC21.12■□□□□ 0.97
COL15A1P39059 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC21.12■□□□□ 0.97
COL15A1P39059 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL15A1P39059 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL15A1P39059 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL15A1P39059 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL15A1P39059 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL15A1P39059 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
COL15A1P39059 AC009407.1-201ENST00000568958 598 ntBASIC21.11■□□□□ 0.97
COL15A1P39059 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC21.11■□□□□ 0.97
COL15A1P39059 SIGLEC29P-201ENST00000599873 1114 ntBASIC21.11■□□□□ 0.97
COL15A1P39059 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL15A1P39059 AC108860.2-201ENST00000562760 2183 ntBASIC21.11■□□□□ 0.97
COL15A1P39059 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL15A1P39059 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC21.11■□□□□ 0.97
COL15A1P39059 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL15A1P39059 TUBB8P12-201ENST00000308911 1335 ntBASIC21.11■□□□□ 0.97
COL15A1P39059 TUBB7P-202ENST00000428444 1305 ntBASIC21.11■□□□□ 0.97
COL15A1P39059 TUBB8P7-204ENST00000567960 1332 ntBASIC21.11■□□□□ 0.97
COL15A1P39059 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC21.11■□□□□ 0.97
COL15A1P39059 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL15A1P39059 AC092053.1-201ENST00000605787 1936 ntBASIC21.11■□□□□ 0.97
COL15A1P39059 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COL15A1P39059 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COL15A1P39059 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL15A1P39059 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL15A1P39059 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC21.1■□□□□ 0.97
COL15A1P39059 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC21.1■□□□□ 0.97
COL15A1P39059 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC21.1■□□□□ 0.97
COL15A1P39059 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC21.1■□□□□ 0.97
COL15A1P39059 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms