Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC19.45■□□□□ 0.7
POLR2AP24928 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC19.45■□□□□ 0.7
POLR2AP24928 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC19.45■□□□□ 0.7
POLR2AP24928 AC015936.2-201ENST00000593177 259 ntBASIC19.45■□□□□ 0.7
POLR2AP24928 TMEM261P1-201ENST00000604899 340 ntBASIC19.45■□□□□ 0.7
POLR2AP24928 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2AP24928 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
POLR2AP24928 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC19.45■□□□□ 0.7
POLR2AP24928 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2AP24928 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
POLR2AP24928 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC19.44■□□□□ 0.7
POLR2AP24928 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
POLR2AP24928 RRP7BP-205ENST00000566851 833 ntBASIC19.44■□□□□ 0.7
POLR2AP24928 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC19.44■□□□□ 0.7
POLR2AP24928 AC133552.6-201ENST00000613406 534 ntBASIC19.44■□□□□ 0.7
POLR2AP24928 MIR6787-201ENST00000616675 61 ntBASIC19.44■□□□□ 0.7
POLR2AP24928 PFAS-212ENST00000625942 396 ntTSL 5 BASIC19.44■□□□□ 0.7
POLR2AP24928 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2AP24928 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2AP24928 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2AP24928 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
POLR2AP24928 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.44■□□□□ 0.7
POLR2AP24928 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2AP24928 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
POLR2AP24928 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
POLR2AP24928 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
POLR2AP24928 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2AP24928 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2AP24928 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2AP24928 MFF-223ENST00000524634 647 ntTSL 2 BASIC19.44■□□□□ 0.7
POLR2AP24928 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC19.44■□□□□ 0.7
POLR2AP24928 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.44■□□□□ 0.7
POLR2AP24928 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.44■□□□□ 0.7
POLR2AP24928 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2AP24928 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC19.44■□□□□ 0.7
POLR2AP24928 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
POLR2AP24928 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.43■□□□□ 0.7
POLR2AP24928 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2AP24928 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2AP24928 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC19.43■□□□□ 0.7
POLR2AP24928 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC19.43■□□□□ 0.7
POLR2AP24928 MPDU1-223ENST00000582151 728 ntBASIC19.43■□□□□ 0.7
POLR2AP24928 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2AP24928 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
POLR2AP24928 KRT8P39-201ENST00000396270 1433 ntBASIC19.43■□□□□ 0.7
POLR2AP24928 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2AP24928 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2AP24928 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
POLR2AP24928 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2AP24928 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2AP24928 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
POLR2AP24928 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2AP24928 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2AP24928 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2AP24928 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2AP24928 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2AP24928 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2AP24928 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2AP24928 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2AP24928 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC19.43■□□□□ 0.7
POLR2AP24928 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC19.43■□□□□ 0.7
POLR2AP24928 MIR1908-201ENST00000410394 80 ntBASIC19.43■□□□□ 0.7
POLR2AP24928 AL354751.1-201ENST00000412768 1863 ntBASIC19.43■□□□□ 0.7
POLR2AP24928 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
POLR2AP24928 PTK7-212ENST00000476760 902 ntTSL 2 BASIC19.43■□□□□ 0.7
POLR2AP24928 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2AP24928 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC19.43■□□□□ 0.7
POLR2AP24928 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC19.43■□□□□ 0.7
POLR2AP24928 PAM16-204ENST00000571941 674 ntTSL 3 BASIC19.43■□□□□ 0.7
POLR2AP24928 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2AP24928 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.43■□□□□ 0.7
POLR2AP24928 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.43■□□□□ 0.7
POLR2AP24928 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
POLR2AP24928 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC19.43■□□□□ 0.7
POLR2AP24928 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2AP24928 AC087289.5-201ENST00000586076 3175 ntBASIC19.42■□□□□ 0.7
POLR2AP24928 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
POLR2AP24928 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2AP24928 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
POLR2AP24928 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
POLR2AP24928 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2AP24928 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.42■□□□□ 0.7
POLR2AP24928 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC19.42■□□□□ 0.7
POLR2AP24928 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
POLR2AP24928 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2AP24928 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2AP24928 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2AP24928 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2AP24928 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.41■□□□□ 0.7
POLR2AP24928 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2AP24928 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.41■□□□□ 0.7
POLR2AP24928 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
POLR2AP24928 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC19.41■□□□□ 0.7
POLR2AP24928 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC19.41■□□□□ 0.7
POLR2AP24928 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC19.41■□□□□ 0.7
POLR2AP24928 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
POLR2AP24928 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC19.41■□□□□ 0.7
POLR2AP24928 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC19.41■□□□□ 0.7
POLR2AP24928 AC124947.2-201ENST00000547118 1133 ntBASIC19.41■□□□□ 0.7
POLR2AP24928 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms