Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.81■□□□□ 0.44
CCDC130P13994 AP002472.1-201ENST00000577490 586 ntBASIC17.81■□□□□ 0.44
CCDC130P13994 AC091812.2-201ENST00000619081 385 ntBASIC17.81■□□□□ 0.44
CCDC130P13994 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC130P13994 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC130P13994 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC130P13994 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CCDC130P13994 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC130P13994 AL391256.1-201ENST00000443260 1855 ntBASIC17.81■□□□□ 0.44
CCDC130P13994 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC130P13994 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC130P13994 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC130P13994 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC130P13994 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC130P13994 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC130P13994 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CCDC130P13994 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
CCDC130P13994 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CCDC130P13994 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC130P13994 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC130P13994 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC130P13994 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC130P13994 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC130P13994 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CCDC130P13994 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC130P13994 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC130P13994 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC130P13994 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC130P13994 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC130P13994 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC130P13994 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
CCDC130P13994 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CCDC130P13994 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CCDC130P13994 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
CCDC130P13994 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC130P13994 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CCDC130P13994 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.8■□□□□ 0.44
CCDC130P13994 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC130P13994 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.8■□□□□ 0.44
CCDC130P13994 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.8■□□□□ 0.44
CCDC130P13994 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC130P13994 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC130P13994 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC130P13994 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC130P13994 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC130P13994 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC130P13994 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC130P13994 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC130P13994 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC130P13994 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC130P13994 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC130P13994 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC130P13994 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC130P13994 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC130P13994 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC130P13994 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CCDC130P13994 PCDHA12-202ENST00000613593 2588 ntBASIC17.8■□□□□ 0.44
CCDC130P13994 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CCDC130P13994 LINC00895-201ENST00000629028 1637 ntBASIC17.8■□□□□ 0.44
CCDC130P13994 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC130P13994 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC130P13994 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC130P13994 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC130P13994 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.79■□□□□ 0.44
CCDC130P13994 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CCDC130P13994 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC130P13994 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC130P13994 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC130P13994 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC130P13994 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC130P13994 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC130P13994 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC130P13994 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC130P13994 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC130P13994 MIR1233-2-201ENST00000408138 82 ntBASIC17.79■□□□□ 0.44
CCDC130P13994 MIR1233-1-201ENST00000408722 82 ntBASIC17.79■□□□□ 0.44
CCDC130P13994 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC130P13994 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC130P13994 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.79■□□□□ 0.44
CCDC130P13994 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC130P13994 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.79■□□□□ 0.44
CCDC130P13994 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC130P13994 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC130P13994 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.79■□□□□ 0.44
CCDC130P13994 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
CCDC130P13994 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC130P13994 C20orf181-201ENST00000623918 480 ntBASIC17.79■□□□□ 0.44
CCDC130P13994 AP001350.2-201ENST00000625104 1094 ntBASIC17.79■□□□□ 0.44
CCDC130P13994 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC130P13994 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CCDC130P13994 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC130P13994 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC130P13994 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CCDC130P13994 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC130P13994 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC130P13994 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC130P13994 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC130P13994 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC130P13994 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC130P13994 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms