Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB2Q9Y5E7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB2Q9Y5E7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB2Q9Y5E7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB2Q9Y5E7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB2Q9Y5E7 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB2Q9Y5E7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB2Q9Y5E7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB2Q9Y5E7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB2Q9Y5E7 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB2Q9Y5E7 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB2Q9Y5E7 AL355306.1-201ENST00000415580 579 ntBASIC18.41■□□□□ 0.54
PCDHB2Q9Y5E7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB2Q9Y5E7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHB2Q9Y5E7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHB2Q9Y5E7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PCDHB2Q9Y5E7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDHB2Q9Y5E7 RFPL4AP1-201ENST00000530883 850 ntBASIC18.41■□□□□ 0.54
PCDHB2Q9Y5E7 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.41■□□□□ 0.54
PCDHB2Q9Y5E7 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PCDHB2Q9Y5E7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PCDHB2Q9Y5E7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
PCDHB2Q9Y5E7 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB2Q9Y5E7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB2Q9Y5E7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PCDHB2Q9Y5E7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB2Q9Y5E7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDHB2Q9Y5E7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.41■□□□□ 0.54
PCDHB2Q9Y5E7 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB2Q9Y5E7 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDHB2Q9Y5E7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 AL353732.1-201ENST00000569618 1459 ntBASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 AL139400.1-201ENST00000366220 510 ntBASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 TSEN15P1-201ENST00000423257 515 ntBASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 AL645939.2-201ENST00000427340 991 ntBASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 TIMM8BP1-201ENST00000452384 211 ntBASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHB2Q9Y5E7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
PCDHB2Q9Y5E7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PCDHB2Q9Y5E7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PCDHB2Q9Y5E7 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB2Q9Y5E7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB2Q9Y5E7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
PCDHB2Q9Y5E7 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHB2Q9Y5E7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB2Q9Y5E7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB2Q9Y5E7 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PCDHB2Q9Y5E7 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB2Q9Y5E7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB2Q9Y5E7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB2Q9Y5E7 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PCDHB2Q9Y5E7 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB2Q9Y5E7 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PCDHB2Q9Y5E7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.39■□□□□ 0.53
PCDHB2Q9Y5E7 FAM86C2P-203ENST00000528684 1004 ntBASIC18.39■□□□□ 0.53
PCDHB2Q9Y5E7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PCDHB2Q9Y5E7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHB2Q9Y5E7 AC026120.1-201ENST00000611536 926 ntBASIC18.39■□□□□ 0.53
PCDHB2Q9Y5E7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PCDHB2Q9Y5E7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PCDHB2Q9Y5E7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB2Q9Y5E7 TOP3BP1-201ENST00000420768 1380 ntBASIC18.39■□□□□ 0.53
PCDHB2Q9Y5E7 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHB2Q9Y5E7 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB2Q9Y5E7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB2Q9Y5E7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB2Q9Y5E7 AC009053.2-201ENST00000563701 2365 ntBASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms