Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
POLR1EQ9GZS1 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
POLR1EQ9GZS1 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
POLR1EQ9GZS1 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
POLR1EQ9GZS1 AC011676.5-201ENST00000624864 2660 ntBASIC17.09■□□□□ 0.33
POLR1EQ9GZS1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
POLR1EQ9GZS1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.08■□□□□ 0.33
POLR1EQ9GZS1 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.08■□□□□ 0.33
POLR1EQ9GZS1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
POLR1EQ9GZS1 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
POLR1EQ9GZS1 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
POLR1EQ9GZS1 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.08■□□□□ 0.33
POLR1EQ9GZS1 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
POLR1EQ9GZS1 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
POLR1EQ9GZS1 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
POLR1EQ9GZS1 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.08■□□□□ 0.33
POLR1EQ9GZS1 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
POLR1EQ9GZS1 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
POLR1EQ9GZS1 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
POLR1EQ9GZS1 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
POLR1EQ9GZS1 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.08■□□□□ 0.32
POLR1EQ9GZS1 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
POLR1EQ9GZS1 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
POLR1EQ9GZS1 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
POLR1EQ9GZS1 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
POLR1EQ9GZS1 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
POLR1EQ9GZS1 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
POLR1EQ9GZS1 AL022342.1-201ENST00000400363 863 ntBASIC17.08■□□□□ 0.32
POLR1EQ9GZS1 AC007967.2-201ENST00000432613 625 ntBASIC17.08■□□□□ 0.32
POLR1EQ9GZS1 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.08■□□□□ 0.32
POLR1EQ9GZS1 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.08■□□□□ 0.32
POLR1EQ9GZS1 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.08■□□□□ 0.32
POLR1EQ9GZS1 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.08■□□□□ 0.32
POLR1EQ9GZS1 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
POLR1EQ9GZS1 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.08■□□□□ 0.32
POLR1EQ9GZS1 AC027601.4-201ENST00000611259 610 ntBASIC17.08■□□□□ 0.32
POLR1EQ9GZS1 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
POLR1EQ9GZS1 AL139011.1-202ENST00000642063 584 ntBASIC17.08■□□□□ 0.32
POLR1EQ9GZS1 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
POLR1EQ9GZS1 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
POLR1EQ9GZS1 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.08■□□□□ 0.32
POLR1EQ9GZS1 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
POLR1EQ9GZS1 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
POLR1EQ9GZS1 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
POLR1EQ9GZS1 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.08■□□□□ 0.32
POLR1EQ9GZS1 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.07■□□□□ 0.32
POLR1EQ9GZS1 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
POLR1EQ9GZS1 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
POLR1EQ9GZS1 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
POLR1EQ9GZS1 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
POLR1EQ9GZS1 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
POLR1EQ9GZS1 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
POLR1EQ9GZS1 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
POLR1EQ9GZS1 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.07■□□□□ 0.32
POLR1EQ9GZS1 AL603756.1-201ENST00000606511 2163 ntBASIC17.07■□□□□ 0.32
POLR1EQ9GZS1 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
POLR1EQ9GZS1 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
POLR1EQ9GZS1 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
POLR1EQ9GZS1 MED15P5-201ENST00000423150 992 ntBASIC17.07■□□□□ 0.32
POLR1EQ9GZS1 AGGF1P2-201ENST00000426656 2106 ntBASIC17.07■□□□□ 0.32
POLR1EQ9GZS1 RHOQP3-201ENST00000437982 621 ntBASIC17.07■□□□□ 0.32
POLR1EQ9GZS1 AL513480.1-201ENST00000451731 511 ntBASIC17.07■□□□□ 0.32
POLR1EQ9GZS1 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.07■□□□□ 0.32
POLR1EQ9GZS1 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
POLR1EQ9GZS1 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.07■□□□□ 0.32
POLR1EQ9GZS1 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.07■□□□□ 0.32
POLR1EQ9GZS1 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.07■□□□□ 0.32
POLR1EQ9GZS1 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
POLR1EQ9GZS1 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
POLR1EQ9GZS1 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
POLR1EQ9GZS1 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.07■□□□□ 0.32
POLR1EQ9GZS1 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
POLR1EQ9GZS1 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
POLR1EQ9GZS1 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
POLR1EQ9GZS1 AC012569.1-201ENST00000591191 1524 ntBASIC17.06■□□□□ 0.32
POLR1EQ9GZS1 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
POLR1EQ9GZS1 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.06■□□□□ 0.32
POLR1EQ9GZS1 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
POLR1EQ9GZS1 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.06■□□□□ 0.32
POLR1EQ9GZS1 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
POLR1EQ9GZS1 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
POLR1EQ9GZS1 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
POLR1EQ9GZS1 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
POLR1EQ9GZS1 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.06■□□□□ 0.32
POLR1EQ9GZS1 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
POLR1EQ9GZS1 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
POLR1EQ9GZS1 RNA5SP416-201ENST00000516838 111 ntBASIC17.06■□□□□ 0.32
POLR1EQ9GZS1 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.06■□□□□ 0.32
POLR1EQ9GZS1 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
POLR1EQ9GZS1 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
POLR1EQ9GZS1 MIR4515-201ENST00000584082 81 ntBASIC17.06■□□□□ 0.32
POLR1EQ9GZS1 CYP2A7P1-201ENST00000595391 815 ntBASIC17.06■□□□□ 0.32
POLR1EQ9GZS1 AC140113.2-201ENST00000604370 208 ntBASIC17.06■□□□□ 0.32
POLR1EQ9GZS1 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.06■□□□□ 0.32
POLR1EQ9GZS1 FAM197Y3-203ENST00000618346 717 ntBASIC17.06■□□□□ 0.32
POLR1EQ9GZS1 AC007064.4-201ENST00000637740 555 ntBASIC17.06■□□□□ 0.32
POLR1EQ9GZS1 AL645728.2-201ENST00000641974 660 ntBASIC17.06■□□□□ 0.32
POLR1EQ9GZS1 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
POLR1EQ9GZS1 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
POLR1EQ9GZS1 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms