Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDCA3Q99618 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDCA3Q99618 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDCA3Q99618 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.35■□□□□ 0.37
CDCA3Q99618 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.35■□□□□ 0.37
CDCA3Q99618 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.35■□□□□ 0.37
CDCA3Q99618 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDCA3Q99618 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.35■□□□□ 0.37
CDCA3Q99618 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDCA3Q99618 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.35■□□□□ 0.37
CDCA3Q99618 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.35■□□□□ 0.37
CDCA3Q99618 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CDCA3Q99618 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.35■□□□□ 0.37
CDCA3Q99618 AL512361.1-201ENST00000554200 418 ntBASIC17.35■□□□□ 0.37
CDCA3Q99618 AC024267.1-201ENST00000582320 895 ntBASIC17.35■□□□□ 0.37
CDCA3Q99618 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.35■□□□□ 0.37
CDCA3Q99618 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.35■□□□□ 0.37
CDCA3Q99618 AC026979.3-201ENST00000607315 403 ntBASIC17.35■□□□□ 0.37
CDCA3Q99618 AC007431.3-201ENST00000623221 587 ntBASIC17.35■□□□□ 0.37
CDCA3Q99618 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.35■□□□□ 0.37
CDCA3Q99618 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDCA3Q99618 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDCA3Q99618 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDCA3Q99618 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDCA3Q99618 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDCA3Q99618 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.35■□□□□ 0.37
CDCA3Q99618 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDCA3Q99618 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDCA3Q99618 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.35■□□□□ 0.37
CDCA3Q99618 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDCA3Q99618 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDCA3Q99618 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDCA3Q99618 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDCA3Q99618 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CDCA3Q99618 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDCA3Q99618 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
CDCA3Q99618 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDCA3Q99618 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDCA3Q99618 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDCA3Q99618 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CDCA3Q99618 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDCA3Q99618 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDCA3Q99618 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDCA3Q99618 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.34■□□□□ 0.37
CDCA3Q99618 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.34■□□□□ 0.37
CDCA3Q99618 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDCA3Q99618 AC112492.5-201ENST00000421897 457 ntBASIC17.34■□□□□ 0.37
CDCA3Q99618 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CDCA3Q99618 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDCA3Q99618 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
CDCA3Q99618 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDCA3Q99618 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.34■□□□□ 0.37
CDCA3Q99618 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDCA3Q99618 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.34■□□□□ 0.37
CDCA3Q99618 AC124947.2-201ENST00000547118 1133 ntBASIC17.34■□□□□ 0.37
CDCA3Q99618 AC044860.1-202ENST00000559481 777 ntBASIC17.34■□□□□ 0.37
CDCA3Q99618 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.34■□□□□ 0.37
CDCA3Q99618 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.34■□□□□ 0.37
CDCA3Q99618 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CDCA3Q99618 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDCA3Q99618 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CDCA3Q99618 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDCA3Q99618 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CDCA3Q99618 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.34■□□□□ 0.37
CDCA3Q99618 AC099568.2-201ENST00000609194 695 ntBASIC17.34■□□□□ 0.37
CDCA3Q99618 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.34■□□□□ 0.37
CDCA3Q99618 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.34■□□□□ 0.37
CDCA3Q99618 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.34■□□□□ 0.37
CDCA3Q99618 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.34■□□□□ 0.37
CDCA3Q99618 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDCA3Q99618 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.34■□□□□ 0.37
CDCA3Q99618 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
CDCA3Q99618 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDCA3Q99618 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
CDCA3Q99618 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDCA3Q99618 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CDCA3Q99618 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDCA3Q99618 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CDCA3Q99618 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDCA3Q99618 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDCA3Q99618 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.33■□□□□ 0.36
CDCA3Q99618 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDCA3Q99618 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDCA3Q99618 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.33■□□□□ 0.36
CDCA3Q99618 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDCA3Q99618 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDCA3Q99618 SDHAP3-202ENST00000515467 728 ntBASIC17.33■□□□□ 0.36
CDCA3Q99618 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.33■□□□□ 0.36
CDCA3Q99618 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.33■□□□□ 0.36
CDCA3Q99618 WASH4P-201ENST00000564273 1246 ntBASIC17.33■□□□□ 0.36
CDCA3Q99618 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.33■□□□□ 0.36
CDCA3Q99618 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.33■□□□□ 0.36
CDCA3Q99618 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.33■□□□□ 0.36
CDCA3Q99618 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
CDCA3Q99618 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.33■□□□□ 0.36
CDCA3Q99618 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.33■□□□□ 0.36
CDCA3Q99618 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.33■□□□□ 0.36
CDCA3Q99618 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.33■□□□□ 0.36
CDCA3Q99618 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CDCA3Q99618 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms