Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CALR3Q96L12 NCF1C-201ENST00000438382 1427 ntBASIC17.88■□□□□ 0.45
CALR3Q96L12 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CALR3Q96L12 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.88■□□□□ 0.45
CALR3Q96L12 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
CALR3Q96L12 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.88■□□□□ 0.45
CALR3Q96L12 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.88■□□□□ 0.45
CALR3Q96L12 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.88■□□□□ 0.45
CALR3Q96L12 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CALR3Q96L12 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CALR3Q96L12 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CALR3Q96L12 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CALR3Q96L12 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CALR3Q96L12 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CALR3Q96L12 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CALR3Q96L12 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CALR3Q96L12 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.87■□□□□ 0.45
CALR3Q96L12 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CALR3Q96L12 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
CALR3Q96L12 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CALR3Q96L12 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CALR3Q96L12 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CALR3Q96L12 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CALR3Q96L12 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CALR3Q96L12 IER3-202ENST00000376377 1350 ntBASIC17.87■□□□□ 0.45
CALR3Q96L12 TOP3BP1-201ENST00000420768 1380 ntBASIC17.87■□□□□ 0.45
CALR3Q96L12 AC243591.1-201ENST00000452967 1364 ntBASIC17.87■□□□□ 0.45
CALR3Q96L12 AC002310.6-201ENST00000624451 1377 ntBASIC17.87■□□□□ 0.45
CALR3Q96L12 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CALR3Q96L12 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CALR3Q96L12 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.87■□□□□ 0.45
CALR3Q96L12 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.87■□□□□ 0.45
CALR3Q96L12 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CALR3Q96L12 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CALR3Q96L12 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CALR3Q96L12 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CALR3Q96L12 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.86■□□□□ 0.45
CALR3Q96L12 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CALR3Q96L12 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CALR3Q96L12 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CALR3Q96L12 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CALR3Q96L12 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CALR3Q96L12 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
CALR3Q96L12 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CALR3Q96L12 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CALR3Q96L12 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CALR3Q96L12 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CALR3Q96L12 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CALR3Q96L12 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CALR3Q96L12 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CALR3Q96L12 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CALR3Q96L12 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CALR3Q96L12 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.86■□□□□ 0.45
CALR3Q96L12 AL049597.2-201ENST00000565575 961 ntBASIC17.86■□□□□ 0.45
CALR3Q96L12 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.86■□□□□ 0.45
CALR3Q96L12 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CALR3Q96L12 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CALR3Q96L12 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
CALR3Q96L12 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.86■□□□□ 0.45
CALR3Q96L12 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CALR3Q96L12 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CALR3Q96L12 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.86■□□□□ 0.45
CALR3Q96L12 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CALR3Q96L12 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CALR3Q96L12 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.86■□□□□ 0.45
CALR3Q96L12 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CALR3Q96L12 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.86■□□□□ 0.45
CALR3Q96L12 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.86■□□□□ 0.45
CALR3Q96L12 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CALR3Q96L12 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CALR3Q96L12 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CALR3Q96L12 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CALR3Q96L12 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.86■□□□□ 0.45
CALR3Q96L12 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CALR3Q96L12 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CALR3Q96L12 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CALR3Q96L12 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CALR3Q96L12 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CALR3Q96L12 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CALR3Q96L12 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CALR3Q96L12 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CALR3Q96L12 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.85■□□□□ 0.45
CALR3Q96L12 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CALR3Q96L12 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CALR3Q96L12 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CALR3Q96L12 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CALR3Q96L12 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
CALR3Q96L12 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CALR3Q96L12 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CALR3Q96L12 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CALR3Q96L12 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.85■□□□□ 0.45
CALR3Q96L12 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CALR3Q96L12 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CALR3Q96L12 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CALR3Q96L12 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CALR3Q96L12 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CALR3Q96L12 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.85■□□□□ 0.45
CALR3Q96L12 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.85■□□□□ 0.45
CALR3Q96L12 KRT16P4-201ENST00000453883 522 ntBASIC17.85■□□□□ 0.45
CALR3Q96L12 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms