Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CLDND2Q8NHS1 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 PI4KAP1-204ENST00000612579 1703 ntBASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 IGLL3P-201ENST00000412472 434 ntBASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
CLDND2Q8NHS1 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 AP001160.2-201ENST00000596071 487 ntBASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 AL513190.1-201ENST00000621254 727 ntBASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 AL135999.2-201ENST00000622438 1686 ntBASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 AL590787.1-201ENST00000568856 1315 ntBASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CLDND2Q8NHS1 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms