Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 PI4KAP1-204ENST00000612579 1703 ntBASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 AC078925.2-201ENST00000624013 1973 ntBASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 AC063926.3-201ENST00000624734 5658 ntBASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 KRT18P27-201ENST00000427733 1299 ntBASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 RN7SL510P-201ENST00000581311 263 ntBASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 GGTLC5P-201ENST00000617623 998 ntBASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TTC9CQ8N5M4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 LINC00895-201ENST00000629028 1637 ntBASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 TOP3BP1-201ENST00000420768 1380 ntBASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 AC073621.1-201ENST00000392730 636 ntBASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 KRT18P67-201ENST00000432816 1264 ntBASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 AC136632.2-201ENST00000512891 861 ntBASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 AL691432.3-201ENST00000621860 400 ntBASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 AC008735.5-201ENST00000623544 497 ntBASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 TP73-AS1-207ENST00000624167 988 ntBASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 PGM5P2-202ENST00000637225 1043 ntBASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms