Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB43Q86YS6 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RAB43Q86YS6 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB43Q86YS6 PCDH8P1-201ENST00000428983 2773 ntBASIC16.18■□□□□ 0.18
RAB43Q86YS6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RAB43Q86YS6 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB43Q86YS6 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
RAB43Q86YS6 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RAB43Q86YS6 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.18■□□□□ 0.18
RAB43Q86YS6 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RAB43Q86YS6 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAB43Q86YS6 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
RAB43Q86YS6 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAB43Q86YS6 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB43Q86YS6 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB43Q86YS6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB43Q86YS6 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB43Q86YS6 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
RAB43Q86YS6 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB43Q86YS6 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB43Q86YS6 AL023806.1-201ENST00000603994 1649 ntBASIC16.17■□□□□ 0.18
RAB43Q86YS6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB43Q86YS6 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB43Q86YS6 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB43Q86YS6 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RAB43Q86YS6 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.17■□□□□ 0.18
RAB43Q86YS6 AP006288.1-201ENST00000446065 395 ntBASIC16.17■□□□□ 0.18
RAB43Q86YS6 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB43Q86YS6 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.17■□□□□ 0.18
RAB43Q86YS6 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB43Q86YS6 C20orf181-201ENST00000623918 480 ntBASIC16.17■□□□□ 0.18
RAB43Q86YS6 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB43Q86YS6 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.17■□□□□ 0.18
RAB43Q86YS6 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAB43Q86YS6 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB43Q86YS6 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RAB43Q86YS6 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB43Q86YS6 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB43Q86YS6 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAB43Q86YS6 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB43Q86YS6 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB43Q86YS6 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB43Q86YS6 NFIC-211ENST00000641145 8399 ntBASIC16.17■□□□□ 0.18
RAB43Q86YS6 AP001094.4-201ENST00000579008 2176 ntBASIC16.17■□□□□ 0.18
RAB43Q86YS6 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB43Q86YS6 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB43Q86YS6 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
RAB43Q86YS6 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB43Q86YS6 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB43Q86YS6 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RAB43Q86YS6 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB43Q86YS6 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB43Q86YS6 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB43Q86YS6 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RAB43Q86YS6 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB43Q86YS6 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB43Q86YS6 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RAB43Q86YS6 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB43Q86YS6 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB43Q86YS6 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB43Q86YS6 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB43Q86YS6 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB43Q86YS6 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB43Q86YS6 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB43Q86YS6 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB43Q86YS6 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
RAB43Q86YS6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB43Q86YS6 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB43Q86YS6 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB43Q86YS6 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB43Q86YS6 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB43Q86YS6 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.16■□□□□ 0.18
RAB43Q86YS6 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB43Q86YS6 DNAJB3-202ENST00000449667 1266 ntBASIC16.16■□□□□ 0.18
RAB43Q86YS6 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.16■□□□□ 0.18
RAB43Q86YS6 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.16■□□□□ 0.18
RAB43Q86YS6 AC096734.2-201ENST00000562054 433 ntBASIC16.16■□□□□ 0.18
RAB43Q86YS6 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.16■□□□□ 0.18
RAB43Q86YS6 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
RAB43Q86YS6 AC007064.4-201ENST00000637740 555 ntBASIC16.16■□□□□ 0.18
RAB43Q86YS6 AC092865.6-201ENST00000642101 219 ntBASIC16.16■□□□□ 0.18
RAB43Q86YS6 UBALD1-205ENST00000590891 2641 ntBASIC16.16■□□□□ 0.18
RAB43Q86YS6 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB43Q86YS6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RAB43Q86YS6 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB43Q86YS6 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB43Q86YS6 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.16■□□□□ 0.18
RAB43Q86YS6 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB43Q86YS6 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB43Q86YS6 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB43Q86YS6 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB43Q86YS6 PI4KAP1-204ENST00000612579 1703 ntBASIC16.16■□□□□ 0.18
RAB43Q86YS6 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RAB43Q86YS6 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB43Q86YS6 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB43Q86YS6 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB43Q86YS6 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.15■□□□□ 0.18
RAB43Q86YS6 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB43Q86YS6 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB43Q86YS6 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms