Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 AC005104.2-201ENST00000427818 678 ntBASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 AC025062.2-201ENST00000605477 670 ntBASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 AL589182.2-201ENST00000619332 1049 ntBASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 AC008735.5-201ENST00000623544 497 ntBASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 IL9RP2-201ENST00000423948 1312 ntBASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
CHMP1BQ7LBR1 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.1
CHMP1BQ7LBR1 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 NCF1C-201ENST00000438382 1427 ntBASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 HNRNPDP1-201ENST00000439535 754 ntBASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 AC092910.1-201ENST00000482027 1129 ntBASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 AC009336.1-201ENST00000608941 1553 ntBASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.64■□□□□ 0.09
CHMP1BQ7LBR1 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP1BQ7LBR1 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CHMP1BQ7LBR1 ZNF259P1-201ENST00000407656 1365 ntBASIC15.63■□□□□ 0.09
CHMP1BQ7LBR1 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP1BQ7LBR1 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.63■□□□□ 0.09
CHMP1BQ7LBR1 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP1BQ7LBR1 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP1BQ7LBR1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CHMP1BQ7LBR1 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP1BQ7LBR1 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP1BQ7LBR1 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP1BQ7LBR1 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.63■□□□□ 0.09
CHMP1BQ7LBR1 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.63■□□□□ 0.09
CHMP1BQ7LBR1 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHMP1BQ7LBR1 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.63■□□□□ 0.09
CHMP1BQ7LBR1 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms