Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASC4Q6P4E1 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.26■□□□□ 0.35
CASC4Q6P4E1 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CASC4Q6P4E1 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
CASC4Q6P4E1 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CASC4Q6P4E1 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
CASC4Q6P4E1 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.26■□□□□ 0.35
CASC4Q6P4E1 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.26■□□□□ 0.35
CASC4Q6P4E1 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASC4Q6P4E1 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CASC4Q6P4E1 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASC4Q6P4E1 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CASC4Q6P4E1 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CASC4Q6P4E1 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASC4Q6P4E1 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 AC079776.2-201ENST00000641154 1609 ntBASIC17.25■□□□□ 0.35
CASC4Q6P4E1 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 AL645728.1-201ENST00000366221 2101 ntBASIC17.25■□□□□ 0.35
CASC4Q6P4E1 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 KRT16P4-201ENST00000453883 522 ntBASIC17.25■□□□□ 0.35
CASC4Q6P4E1 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.25■□□□□ 0.35
CASC4Q6P4E1 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.24■□□□□ 0.35
CASC4Q6P4E1 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASC4Q6P4E1 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.24■□□□□ 0.35
CASC4Q6P4E1 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.24■□□□□ 0.35
CASC4Q6P4E1 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASC4Q6P4E1 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASC4Q6P4E1 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASC4Q6P4E1 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.24■□□□□ 0.35
CASC4Q6P4E1 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASC4Q6P4E1 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASC4Q6P4E1 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASC4Q6P4E1 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.24■□□□□ 0.35
CASC4Q6P4E1 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASC4Q6P4E1 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.24■□□□□ 0.35
CASC4Q6P4E1 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.24■□□□□ 0.35
CASC4Q6P4E1 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CASC4Q6P4E1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CASC4Q6P4E1 AC132008.2-207ENST00000454517 770 ntBASIC17.24■□□□□ 0.35
CASC4Q6P4E1 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.24■□□□□ 0.35
CASC4Q6P4E1 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CASC4Q6P4E1 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.24■□□□□ 0.35
CASC4Q6P4E1 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.24■□□□□ 0.35
CASC4Q6P4E1 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CASC4Q6P4E1 AC010331.1-201ENST00000611423 582 ntBASIC17.24■□□□□ 0.35
CASC4Q6P4E1 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
CASC4Q6P4E1 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CASC4Q6P4E1 PCDH8P1-201ENST00000428983 2773 ntBASIC17.24■□□□□ 0.35
CASC4Q6P4E1 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CASC4Q6P4E1 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.24■□□□□ 0.35
CASC4Q6P4E1 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.24■□□□□ 0.35
CASC4Q6P4E1 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASC4Q6P4E1 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASC4Q6P4E1 AL021920.2-201ENST00000624828 1351 ntBASIC17.24■□□□□ 0.35
CASC4Q6P4E1 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASC4Q6P4E1 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CASC4Q6P4E1 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.24■□□□□ 0.35
CASC4Q6P4E1 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CASC4Q6P4E1 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.23■□□□□ 0.35
CASC4Q6P4E1 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASC4Q6P4E1 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms