Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USH1GQ495M9 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
USH1GQ495M9 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.31■□□□□ 0.68
USH1GQ495M9 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.31■□□□□ 0.68
USH1GQ495M9 TSEN15P1-201ENST00000423257 515 ntBASIC19.31■□□□□ 0.68
USH1GQ495M9 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
USH1GQ495M9 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.31■□□□□ 0.68
USH1GQ495M9 FAM86C2P-203ENST00000528684 1004 ntBASIC19.31■□□□□ 0.68
USH1GQ495M9 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
USH1GQ495M9 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.31■□□□□ 0.68
USH1GQ495M9 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.31■□□□□ 0.68
USH1GQ495M9 MIR4492-201ENST00000581627 80 ntBASIC19.31■□□□□ 0.68
USH1GQ495M9 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.31■□□□□ 0.68
USH1GQ495M9 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.31■□□□□ 0.68
USH1GQ495M9 AL161645.1-201ENST00000622716 1255 ntBASIC19.31■□□□□ 0.68
USH1GQ495M9 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.31■□□□□ 0.68
USH1GQ495M9 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
USH1GQ495M9 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USH1GQ495M9 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USH1GQ495M9 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.31■□□□□ 0.68
USH1GQ495M9 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
USH1GQ495M9 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
USH1GQ495M9 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USH1GQ495M9 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.3■□□□□ 0.68
USH1GQ495M9 TUBB8P12-201ENST00000308911 1335 ntBASIC19.3■□□□□ 0.68
USH1GQ495M9 TUBB7P-202ENST00000428444 1305 ntBASIC19.3■□□□□ 0.68
USH1GQ495M9 TUBB8P7-204ENST00000567960 1332 ntBASIC19.3■□□□□ 0.68
USH1GQ495M9 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USH1GQ495M9 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.3■□□□□ 0.68
USH1GQ495M9 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USH1GQ495M9 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.3■□□□□ 0.68
USH1GQ495M9 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.3■□□□□ 0.68
USH1GQ495M9 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USH1GQ495M9 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
USH1GQ495M9 AL139400.1-201ENST00000366220 510 ntBASIC19.3■□□□□ 0.68
USH1GQ495M9 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
USH1GQ495M9 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USH1GQ495M9 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.3■□□□□ 0.68
USH1GQ495M9 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.3■□□□□ 0.68
USH1GQ495M9 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USH1GQ495M9 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.3■□□□□ 0.68
USH1GQ495M9 AC079140.1-201ENST00000508039 487 ntBASIC19.3■□□□□ 0.68
USH1GQ495M9 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.3■□□□□ 0.68
USH1GQ495M9 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.3■□□□□ 0.68
USH1GQ495M9 AC093028.1-201ENST00000622998 982 ntBASIC19.3■□□□□ 0.68
USH1GQ495M9 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USH1GQ495M9 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
USH1GQ495M9 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.3■□□□□ 0.68
USH1GQ495M9 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USH1GQ495M9 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.3■□□□□ 0.68
USH1GQ495M9 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USH1GQ495M9 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USH1GQ495M9 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
USH1GQ495M9 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
USH1GQ495M9 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.29■□□□□ 0.68
USH1GQ495M9 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USH1GQ495M9 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USH1GQ495M9 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USH1GQ495M9 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
USH1GQ495M9 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
USH1GQ495M9 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
USH1GQ495M9 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USH1GQ495M9 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
USH1GQ495M9 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USH1GQ495M9 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USH1GQ495M9 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USH1GQ495M9 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USH1GQ495M9 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
USH1GQ495M9 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.29■□□□□ 0.68
USH1GQ495M9 AC092474.2-201ENST00000424288 719 ntBASIC19.29■□□□□ 0.68
USH1GQ495M9 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.29■□□□□ 0.68
USH1GQ495M9 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.29■□□□□ 0.68
USH1GQ495M9 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.29■□□□□ 0.68
USH1GQ495M9 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.29■□□□□ 0.68
USH1GQ495M9 AL592309.1-201ENST00000443127 649 ntBASIC19.29■□□□□ 0.68
USH1GQ495M9 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USH1GQ495M9 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.29■□□□□ 0.68
USH1GQ495M9 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.29■□□□□ 0.68
USH1GQ495M9 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
USH1GQ495M9 AC109635.5-201ENST00000533593 962 ntBASIC19.29■□□□□ 0.68
USH1GQ495M9 AC243562.1-201ENST00000560672 389 ntBASIC19.29■□□□□ 0.68
USH1GQ495M9 AC093520.2-201ENST00000561830 333 ntBASIC19.29■□□□□ 0.68
USH1GQ495M9 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USH1GQ495M9 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.29■□□□□ 0.68
USH1GQ495M9 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.29■□□□□ 0.68
USH1GQ495M9 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.29■□□□□ 0.68
USH1GQ495M9 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
USH1GQ495M9 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.29■□□□□ 0.68
USH1GQ495M9 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
USH1GQ495M9 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USH1GQ495M9 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USH1GQ495M9 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.29■□□□□ 0.68
USH1GQ495M9 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.29■□□□□ 0.68
USH1GQ495M9 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USH1GQ495M9 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.29■□□□□ 0.68
USH1GQ495M9 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
USH1GQ495M9 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
USH1GQ495M9 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
USH1GQ495M9 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.29■□□□□ 0.68
USH1GQ495M9 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms