Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC18.74■□□□□ 0.59
LBX1P52954 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC18.74■□□□□ 0.59
LBX1P52954 KLK3-211ENST00000597483 810 ntTSL 2 BASIC18.74■□□□□ 0.59
LBX1P52954 AC097724.1-201ENST00000609581 426 ntBASIC18.74■□□□□ 0.59
LBX1P52954 AC074044.1-201ENST00000609673 707 ntBASIC18.74■□□□□ 0.59
LBX1P52954 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LBX1P52954 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LBX1P52954 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LBX1P52954 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LBX1P52954 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LBX1P52954 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LBX1P52954 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LBX1P52954 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LBX1P52954 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LBX1P52954 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LBX1P52954 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.74■□□□□ 0.59
LBX1P52954 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
LBX1P52954 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
LBX1P52954 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
LBX1P52954 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LBX1P52954 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LBX1P52954 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
LBX1P52954 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
LBX1P52954 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
LBX1P52954 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
LBX1P52954 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
LBX1P52954 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.73■□□□□ 0.59
LBX1P52954 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LBX1P52954 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
LBX1P52954 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.73■□□□□ 0.59
LBX1P52954 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LBX1P52954 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
LBX1P52954 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LBX1P52954 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC18.73■□□□□ 0.59
LBX1P52954 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LBX1P52954 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC18.73■□□□□ 0.59
LBX1P52954 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.73■□□□□ 0.59
LBX1P52954 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC18.73■□□□□ 0.59
LBX1P52954 AC004898.1-201ENST00000451057 766 ntBASIC18.73■□□□□ 0.59
LBX1P52954 Z93015.1-201ENST00000451718 390 ntBASIC18.73■□□□□ 0.59
LBX1P52954 AL591846.1-201ENST00000451736 433 ntBASIC18.73■□□□□ 0.59
LBX1P52954 TSACC-208ENST00000481479 741 ntTSL 2 BASIC18.73■□□□□ 0.59
LBX1P52954 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC18.73■□□□□ 0.59
LBX1P52954 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18.73■□□□□ 0.59
LBX1P52954 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LBX1P52954 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.73■□□□□ 0.59
LBX1P52954 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
LBX1P52954 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LBX1P52954 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LBX1P52954 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LBX1P52954 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
LBX1P52954 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LBX1P52954 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LBX1P52954 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC18.73■□□□□ 0.59
LBX1P52954 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
LBX1P52954 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LBX1P52954 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.73■□□□□ 0.59
LBX1P52954 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LBX1P52954 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.72■□□□□ 0.59
LBX1P52954 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.72■□□□□ 0.59
LBX1P52954 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LBX1P52954 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
LBX1P52954 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.72■□□□□ 0.59
LBX1P52954 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.72■□□□□ 0.59
LBX1P52954 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
LBX1P52954 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LBX1P52954 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC18.72■□□□□ 0.59
LBX1P52954 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.72■□□□□ 0.59
LBX1P52954 FTLP10-202ENST00000505798 471 ntBASIC18.72■□□□□ 0.59
LBX1P52954 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC18.72■□□□□ 0.59
LBX1P52954 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.72■□□□□ 0.59
LBX1P52954 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LBX1P52954 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LBX1P52954 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LBX1P52954 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LBX1P52954 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
LBX1P52954 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LBX1P52954 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LBX1P52954 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
LBX1P52954 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LBX1P52954 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LBX1P52954 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.71■□□□□ 0.59
LBX1P52954 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LBX1P52954 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LBX1P52954 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.71■□□□□ 0.59
LBX1P52954 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LBX1P52954 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LBX1P52954 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LBX1P52954 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
LBX1P52954 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LBX1P52954 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
LBX1P52954 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.71■□□□□ 0.59
LBX1P52954 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC18.71■□□□□ 0.59
LBX1P52954 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.71■□□□□ 0.59
LBX1P52954 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC18.71■□□□□ 0.59
LBX1P52954 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.71■□□□□ 0.59
LBX1P52954 AL359711.2-201ENST00000563105 872 ntBASIC18.71■□□□□ 0.59
LBX1P52954 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
LBX1P52954 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.71■□□□□ 0.59
LBX1P52954 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms