Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC34P49427 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.39□□□□□ -0.27
CDC34P49427 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CDC34P49427 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC34P49427 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CDC34P49427 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.39□□□□□ -0.27
CDC34P49427 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDC34P49427 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CDC34P49427 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDC34P49427 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC34P49427 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC34P49427 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC34P49427 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
CDC34P49427 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.38□□□□□ -0.27
CDC34P49427 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC34P49427 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC34P49427 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC34P49427 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.38□□□□□ -0.27
CDC34P49427 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC34P49427 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC34P49427 AC010460.3-201ENST00000511359 1579 ntBASIC13.38□□□□□ -0.27
CDC34P49427 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC13.38□□□□□ -0.27
CDC34P49427 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC34P49427 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDC34P49427 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CDC34P49427 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC34P49427 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC34P49427 AL390955.1-201ENST00000428694 934 ntBASIC13.38□□□□□ -0.27
CDC34P49427 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC13.38□□□□□ -0.27
CDC34P49427 PON3-205ENST00000451904 1053 ntTSL 3 BASIC13.38□□□□□ -0.27
CDC34P49427 AC128688.1-201ENST00000487626 519 ntBASIC13.38□□□□□ -0.27
CDC34P49427 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC13.38□□□□□ -0.27
CDC34P49427 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC13.38□□□□□ -0.27
CDC34P49427 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC13.38□□□□□ -0.27
CDC34P49427 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC13.38□□□□□ -0.27
CDC34P49427 PPOX-214ENST00000535223 664 ntTSL 3 BASIC13.38□□□□□ -0.27
CDC34P49427 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC13.38□□□□□ -0.27
CDC34P49427 AC019129.2-201ENST00000609837 1235 ntBASIC13.38□□□□□ -0.27
CDC34P49427 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDC34P49427 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC34P49427 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CDC34P49427 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CDC34P49427 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC34P49427 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC34P49427 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC34P49427 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC34P49427 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CDC34P49427 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CDC34P49427 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.38□□□□□ -0.27
CDC34P49427 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC34P49427 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CDC34P49427 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CDC34P49427 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.38□□□□□ -0.27
CDC34P49427 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC34P49427 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.37□□□□□ -0.27
CDC34P49427 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.37□□□□□ -0.27
CDC34P49427 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CDC34P49427 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDC34P49427 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC34P49427 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDC34P49427 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC34P49427 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDC34P49427 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.37□□□□□ -0.27
CDC34P49427 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CDC34P49427 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CDC34P49427 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC13.37□□□□□ -0.27
CDC34P49427 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC34P49427 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC34P49427 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.37□□□□□ -0.27
CDC34P49427 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.37□□□□□ -0.27
CDC34P49427 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC34P49427 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC34P49427 TSPY14P-201ENST00000303979 915 ntBASIC13.37□□□□□ -0.27
CDC34P49427 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.37□□□□□ -0.27
CDC34P49427 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC13.37□□□□□ -0.27
CDC34P49427 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDC34P49427 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC13.37□□□□□ -0.27
CDC34P49427 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC13.37□□□□□ -0.27
CDC34P49427 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC13.37□□□□□ -0.27
CDC34P49427 AC233702.5-201ENST00000584107 538 ntBASIC13.37□□□□□ -0.27
CDC34P49427 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC13.37□□□□□ -0.27
CDC34P49427 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC34P49427 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC13.37□□□□□ -0.27
CDC34P49427 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC13.37□□□□□ -0.27
CDC34P49427 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC13.37□□□□□ -0.27
CDC34P49427 AP000525.1-201ENST00000608286 694 ntBASIC13.37□□□□□ -0.27
CDC34P49427 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC34P49427 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC34P49427 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC34P49427 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.37□□□□□ -0.27
CDC34P49427 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC34P49427 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.37□□□□□ -0.27
CDC34P49427 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC34P49427 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC34P49427 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CDC34P49427 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC34P49427 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC34P49427 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC34P49427 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CDC34P49427 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms