Protein–RNA interactions for Protein: P46109

CRKL, Crk-like protein, humanhuman

Known RBP Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRKLP46109 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC21.1■□□□□ 0.97
CRKLP46109 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CRKLP46109 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC21.1■□□□□ 0.97
CRKLP46109 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CRKLP46109 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CRKLP46109 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CRKLP46109 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CRKLP46109 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CRKLP46109 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CRKLP46109 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CRKLP46109 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC21.09■□□□□ 0.97
CRKLP46109 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CRKLP46109 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CRKLP46109 AC006277.1-201ENST00000624348 1610 ntBASIC21.09■□□□□ 0.97
CRKLP46109 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CRKLP46109 AC098614.1-201ENST00000368528 745 ntBASIC21.09■□□□□ 0.97
CRKLP46109 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CRKLP46109 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
CRKLP46109 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC21.09■□□□□ 0.97
CRKLP46109 IGHV3-71-201ENST00000523324 359 ntBASIC21.09■□□□□ 0.97
CRKLP46109 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CRKLP46109 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CRKLP46109 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC21.09■□□□□ 0.97
CRKLP46109 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CRKLP46109 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CRKLP46109 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CRKLP46109 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CRKLP46109 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CRKLP46109 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CRKLP46109 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC21.09■□□□□ 0.97
CRKLP46109 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC21.09■□□□□ 0.97
CRKLP46109 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC21.08■□□□□ 0.97
CRKLP46109 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC21.08■□□□□ 0.97
CRKLP46109 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC21.08■□□□□ 0.97
CRKLP46109 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CRKLP46109 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.08■□□□□ 0.97
CRKLP46109 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CRKLP46109 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CRKLP46109 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CRKLP46109 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CRKLP46109 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CRKLP46109 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CRKLP46109 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CRKLP46109 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CRKLP46109 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC21.08■□□□□ 0.97
CRKLP46109 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
CRKLP46109 INE1-201ENST00000456273 945 ntBASIC21.08■□□□□ 0.97
CRKLP46109 GPR53P-205ENST00000457298 1084 ntBASIC21.08■□□□□ 0.97
CRKLP46109 GIMAP3P-201ENST00000495150 836 ntBASIC21.08■□□□□ 0.97
CRKLP46109 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC21.08■□□□□ 0.97
CRKLP46109 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
CRKLP46109 HILS1-202ENST00000545329 423 ntBASIC21.08■□□□□ 0.97
CRKLP46109 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC21.08■□□□□ 0.97
CRKLP46109 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC21.08■□□□□ 0.97
CRKLP46109 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CRKLP46109 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CRKLP46109 LINC02012-201ENST00000608206 1725 ntBASIC21.08■□□□□ 0.97
CRKLP46109 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC21.08■□□□□ 0.97
CRKLP46109 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CRKLP46109 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CRKLP46109 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
CRKLP46109 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CRKLP46109 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CRKLP46109 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC21.08■□□□□ 0.96
CRKLP46109 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CRKLP46109 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CRKLP46109 BTBD7P1-201ENST00000447253 1453 ntBASIC21.07■□□□□ 0.96
CRKLP46109 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC21.07■□□□□ 0.96
CRKLP46109 CD276-203ENST00000537340 2439 ntTSL 2 BASIC21.07■□□□□ 0.96
CRKLP46109 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CRKLP46109 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CRKLP46109 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CRKLP46109 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC21.07■□□□□ 0.96
CRKLP46109 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CRKLP46109 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CRKLP46109 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CRKLP46109 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CRKLP46109 DFFBP1-201ENST00000433250 979 ntBASIC21.07■□□□□ 0.96
CRKLP46109 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CRKLP46109 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC21.07■□□□□ 0.96
CRKLP46109 AL512361.1-201ENST00000554200 418 ntBASIC21.07■□□□□ 0.96
CRKLP46109 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC21.07■□□□□ 0.96
CRKLP46109 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC21.07■□□□□ 0.96
CRKLP46109 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC21.07■□□□□ 0.96
CRKLP46109 AC013467.2-201ENST00000605472 835 ntBASIC21.07■□□□□ 0.96
CRKLP46109 FHL2-212ENST00000607522 759 ntTSL 2 BASIC21.07■□□□□ 0.96
CRKLP46109 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CRKLP46109 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CRKLP46109 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CRKLP46109 SNX33P1-201ENST00000592116 1762 ntBASIC21.07■□□□□ 0.96
CRKLP46109 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CRKLP46109 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CRKLP46109 TUBB8P12-201ENST00000308911 1335 ntBASIC21.06■□□□□ 0.96
CRKLP46109 TUBB7P-202ENST00000428444 1305 ntBASIC21.06■□□□□ 0.96
CRKLP46109 TUBB8P7-204ENST00000567960 1332 ntBASIC21.06■□□□□ 0.96
CRKLP46109 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC21.06■□□□□ 0.96
CRKLP46109 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CRKLP46109 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.06■□□□□ 0.96
CRKLP46109 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CRKLP46109 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms