Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fen1P39749 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Fen1P39749 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fen1P39749 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fen1P39749 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fen1P39749 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fen1P39749 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Fen1P39749 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fen1P39749 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Fen1P39749 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.99□□□□□ -0.17
Fen1P39749 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fen1P39749 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Fen1P39749 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Fen1P39749 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fen1P39749 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Fen1P39749 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Fen1P39749 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fen1P39749 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Fen1P39749 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fen1P39749 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Fen1P39749 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Fen1P39749 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Fen1P39749 Gm11779-201ENSMUST00000118541 368 ntBASIC13.98□□□□□ -0.17
Fen1P39749 Gm5479-201ENSMUST00000160578 435 ntBASIC13.98□□□□□ -0.17
Fen1P39749 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.98□□□□□ -0.17
Fen1P39749 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Fen1P39749 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fen1P39749 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Fen1P39749 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fen1P39749 Thap2-203ENSMUST00000218989 527 ntBASIC13.98□□□□□ -0.17
Fen1P39749 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.98□□□□□ -0.17
Fen1P39749 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fen1P39749 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Fen1P39749 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fen1P39749 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Fen1P39749 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fen1P39749 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fen1P39749 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
Fen1P39749 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fen1P39749 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fen1P39749 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fen1P39749 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Fen1P39749 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fen1P39749 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fen1P39749 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Fen1P39749 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Fen1P39749 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fen1P39749 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fen1P39749 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Fen1P39749 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fen1P39749 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Fen1P39749 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fen1P39749 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fen1P39749 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fen1P39749 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Fen1P39749 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Fen1P39749 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Fen1P39749 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fen1P39749 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fen1P39749 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fen1P39749 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fen1P39749 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Fen1P39749 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fen1P39749 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.97□□□□□ -0.17
Fen1P39749 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fen1P39749 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.97□□□□□ -0.17
Fen1P39749 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fen1P39749 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.97□□□□□ -0.17
Fen1P39749 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fen1P39749 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.97□□□□□ -0.17
Fen1P39749 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.97□□□□□ -0.17
Fen1P39749 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Fen1P39749 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fen1P39749 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fen1P39749 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fen1P39749 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fen1P39749 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Fen1P39749 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fen1P39749 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Fen1P39749 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fen1P39749 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fen1P39749 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.97□□□□□ -0.17
Fen1P39749 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fen1P39749 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fen1P39749 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fen1P39749 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Fen1P39749 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fen1P39749 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fen1P39749 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Fen1P39749 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fen1P39749 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Fen1P39749 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Fen1P39749 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Fen1P39749 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fen1P39749 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fen1P39749 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fen1P39749 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Fen1P39749 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Fen1P39749 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fen1P39749 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms