Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AL391005.1-201ENST00000623953 2435 ntBASIC16.66■□□□□ 0.26
CAPN1P07384 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN1P07384 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN1P07384 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CAPN1P07384 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN1P07384 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN1P07384 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN1P07384 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CAPN1P07384 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.66■□□□□ 0.26
CAPN1P07384 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CAPN1P07384 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.66■□□□□ 0.26
CAPN1P07384 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN1P07384 KRT18P58-201ENST00000527480 1120 ntBASIC16.66■□□□□ 0.26
CAPN1P07384 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.66■□□□□ 0.26
CAPN1P07384 AC145285.3-201ENST00000564603 959 ntBASIC16.66■□□□□ 0.26
CAPN1P07384 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.66■□□□□ 0.26
CAPN1P07384 AC006538.3-201ENST00000612495 578 ntBASIC16.66■□□□□ 0.26
CAPN1P07384 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN1P07384 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CAPN1P07384 AC107918.4-202ENST00000641623 219 ntBASIC16.66■□□□□ 0.26
CAPN1P07384 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN1P07384 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CAPN1P07384 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN1P07384 GPR89P-201ENST00000407924 1495 ntBASIC16.66■□□□□ 0.26
CAPN1P07384 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN1P07384 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN1P07384 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.66■□□□□ 0.26
CAPN1P07384 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN1P07384 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN1P07384 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN1P07384 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN1P07384 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN1P07384 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.65■□□□□ 0.26
CAPN1P07384 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN1P07384 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN1P07384 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CAPN1P07384 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN1P07384 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN1P07384 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN1P07384 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN1P07384 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.65■□□□□ 0.26
CAPN1P07384 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.65■□□□□ 0.26
CAPN1P07384 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN1P07384 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CAPN1P07384 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CAPN1P07384 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CAPN1P07384 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN1P07384 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
CAPN1P07384 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.65■□□□□ 0.26
CAPN1P07384 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CAPN1P07384 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.65■□□□□ 0.26
CAPN1P07384 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.65■□□□□ 0.26
CAPN1P07384 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.65■□□□□ 0.26
CAPN1P07384 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.65■□□□□ 0.26
CAPN1P07384 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.65■□□□□ 0.26
CAPN1P07384 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.65■□□□□ 0.26
CAPN1P07384 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
CAPN1P07384 AC008735.5-201ENST00000623544 497 ntBASIC16.65■□□□□ 0.26
CAPN1P07384 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CAPN1P07384 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN1P07384 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN1P07384 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
CAPN1P07384 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN1P07384 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.65■□□□□ 0.26
CAPN1P07384 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN1P07384 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.65■□□□□ 0.26
CAPN1P07384 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN1P07384 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.65■□□□□ 0.26
CAPN1P07384 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN1P07384 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN1P07384 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.65■□□□□ 0.26
CAPN1P07384 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CAPN1P07384 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CAPN1P07384 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN1P07384 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN1P07384 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CAPN1P07384 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN1P07384 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CAPN1P07384 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CAPN1P07384 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
CAPN1P07384 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.64■□□□□ 0.25
CAPN1P07384 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN1P07384 PCDHB19P-201ENST00000570871 2371 ntBASIC16.64■□□□□ 0.25
CAPN1P07384 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN1P07384 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CAPN1P07384 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.64■□□□□ 0.25
CAPN1P07384 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.64■□□□□ 0.25
CAPN1P07384 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.64■□□□□ 0.25
CAPN1P07384 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CAPN1P07384 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN1P07384 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CAPN1P07384 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN1P07384 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
CAPN1P07384 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.64■□□□□ 0.25
CAPN1P07384 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.64■□□□□ 0.25
CAPN1P07384 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.64■□□□□ 0.25
CAPN1P07384 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.64■□□□□ 0.25
CAPN1P07384 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN1P07384 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.64■□□□□ 0.25
CAPN1P07384 AC117500.6-201ENST00000624871 588 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms