Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.89■□□□□ 0.29
CFAP99D6REC4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CFAP99D6REC4 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CFAP99D6REC4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CFAP99D6REC4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.88■□□□□ 0.29
CFAP99D6REC4 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CFAP99D6REC4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.88■□□□□ 0.29
CFAP99D6REC4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CFAP99D6REC4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CFAP99D6REC4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CFAP99D6REC4 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CFAP99D6REC4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CFAP99D6REC4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CFAP99D6REC4 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CFAP99D6REC4 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
CFAP99D6REC4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CFAP99D6REC4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CFAP99D6REC4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CFAP99D6REC4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.88■□□□□ 0.29
CFAP99D6REC4 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.88■□□□□ 0.29
CFAP99D6REC4 AC098831.1-202ENST00000438821 336 ntBASIC16.88■□□□□ 0.29
CFAP99D6REC4 PAWRP1-201ENST00000451083 565 ntBASIC16.88■□□□□ 0.29
CFAP99D6REC4 IGHV3-65-201ENST00000523210 341 ntBASIC16.88■□□□□ 0.29
CFAP99D6REC4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
CFAP99D6REC4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.88■□□□□ 0.29
CFAP99D6REC4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.88■□□□□ 0.29
CFAP99D6REC4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CFAP99D6REC4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.88■□□□□ 0.29
CFAP99D6REC4 AC116407.3-201ENST00000623905 1129 ntBASIC16.88■□□□□ 0.29
CFAP99D6REC4 AC117500.6-201ENST00000624871 588 ntBASIC16.88■□□□□ 0.29
CFAP99D6REC4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.88■□□□□ 0.29
CFAP99D6REC4 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CFAP99D6REC4 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CFAP99D6REC4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CFAP99D6REC4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CFAP99D6REC4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.88■□□□□ 0.29
CFAP99D6REC4 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CFAP99D6REC4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
CFAP99D6REC4 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CFAP99D6REC4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CFAP99D6REC4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CFAP99D6REC4 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CFAP99D6REC4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.88■□□□□ 0.29
CFAP99D6REC4 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CFAP99D6REC4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CFAP99D6REC4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CFAP99D6REC4 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.87■□□□□ 0.29
CFAP99D6REC4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CFAP99D6REC4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CFAP99D6REC4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.87■□□□□ 0.29
CFAP99D6REC4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CFAP99D6REC4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.87■□□□□ 0.29
CFAP99D6REC4 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CFAP99D6REC4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CFAP99D6REC4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CFAP99D6REC4 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CFAP99D6REC4 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CFAP99D6REC4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.87■□□□□ 0.29
CFAP99D6REC4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CFAP99D6REC4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CFAP99D6REC4 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.87■□□□□ 0.29
CFAP99D6REC4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
CFAP99D6REC4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CFAP99D6REC4 AC022211.2-201ENST00000585075 2527 ntBASIC16.87■□□□□ 0.29
CFAP99D6REC4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CFAP99D6REC4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CFAP99D6REC4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CFAP99D6REC4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CFAP99D6REC4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.87■□□□□ 0.29
CFAP99D6REC4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.87■□□□□ 0.29
CFAP99D6REC4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.87■□□□□ 0.29
CFAP99D6REC4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.87■□□□□ 0.29
CFAP99D6REC4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.87■□□□□ 0.29
CFAP99D6REC4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.87■□□□□ 0.29
CFAP99D6REC4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CFAP99D6REC4 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.87■□□□□ 0.29
CFAP99D6REC4 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CFAP99D6REC4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CFAP99D6REC4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CFAP99D6REC4 AC092053.1-201ENST00000605787 1936 ntBASIC16.87■□□□□ 0.29
CFAP99D6REC4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.87■□□□□ 0.29
CFAP99D6REC4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.87■□□□□ 0.29
CFAP99D6REC4 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CFAP99D6REC4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CFAP99D6REC4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CFAP99D6REC4 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CFAP99D6REC4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CFAP99D6REC4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CFAP99D6REC4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.87■□□□□ 0.29
CFAP99D6REC4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.87■□□□□ 0.29
CFAP99D6REC4 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CFAP99D6REC4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
CFAP99D6REC4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CFAP99D6REC4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.87■□□□□ 0.29
CFAP99D6REC4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CFAP99D6REC4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CFAP99D6REC4 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CFAP99D6REC4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CFAP99D6REC4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CFAP99D6REC4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms