Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TLR9Q9NR96 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TLR9Q9NR96 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TLR9Q9NR96 TSSK5P-201ENST00000423978 907 ntBASIC17.82■□□□□ 0.44
TLR9Q9NR96 AC142381.1-201ENST00000426099 345 ntBASIC17.82■□□□□ 0.44
TLR9Q9NR96 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.82■□□□□ 0.44
TLR9Q9NR96 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.82■□□□□ 0.44
TLR9Q9NR96 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.82■□□□□ 0.44
TLR9Q9NR96 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TLR9Q9NR96 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TLR9Q9NR96 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.82■□□□□ 0.44
TLR9Q9NR96 AC105233.2-201ENST00000523697 349 ntBASIC17.82■□□□□ 0.44
TLR9Q9NR96 AF228730.5-201ENST00000530288 346 ntBASIC17.82■□□□□ 0.44
TLR9Q9NR96 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.82■□□□□ 0.44
TLR9Q9NR96 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TLR9Q9NR96 RARRES2P9-201ENST00000565168 469 ntBASIC17.82■□□□□ 0.44
TLR9Q9NR96 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.82■□□□□ 0.44
TLR9Q9NR96 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.82■□□□□ 0.44
TLR9Q9NR96 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.82■□□□□ 0.44
TLR9Q9NR96 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TLR9Q9NR96 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.82■□□□□ 0.44
TLR9Q9NR96 AC003101.2-201ENST00000612557 442 ntBASIC17.82■□□□□ 0.44
TLR9Q9NR96 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.82■□□□□ 0.44
TLR9Q9NR96 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TLR9Q9NR96 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TLR9Q9NR96 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TLR9Q9NR96 AC022144.1-201ENST00000602255 1580 ntBASIC17.82■□□□□ 0.44
TLR9Q9NR96 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TLR9Q9NR96 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
TLR9Q9NR96 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TLR9Q9NR96 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
TLR9Q9NR96 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TLR9Q9NR96 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
TLR9Q9NR96 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TLR9Q9NR96 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TLR9Q9NR96 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TLR9Q9NR96 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.81■□□□□ 0.44
TLR9Q9NR96 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TLR9Q9NR96 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
TLR9Q9NR96 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TLR9Q9NR96 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TLR9Q9NR96 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.81■□□□□ 0.44
TLR9Q9NR96 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.81■□□□□ 0.44
TLR9Q9NR96 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.81■□□□□ 0.44
TLR9Q9NR96 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TLR9Q9NR96 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.81■□□□□ 0.44
TLR9Q9NR96 MPDU1-223ENST00000582151 728 ntBASIC17.81■□□□□ 0.44
TLR9Q9NR96 AC004233.3-201ENST00000607794 1269 ntBASIC17.81■□□□□ 0.44
TLR9Q9NR96 SPDYE12P-201ENST00000618416 771 ntBASIC17.81■□□□□ 0.44
TLR9Q9NR96 MIR6752-201ENST00000618442 71 ntBASIC17.81■□□□□ 0.44
TLR9Q9NR96 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TLR9Q9NR96 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TLR9Q9NR96 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TLR9Q9NR96 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.81■□□□□ 0.44
TLR9Q9NR96 FZD10-202ENST00000539839 3282 ntBASIC17.81■□□□□ 0.44
TLR9Q9NR96 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TLR9Q9NR96 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.81■□□□□ 0.44
TLR9Q9NR96 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TLR9Q9NR96 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TLR9Q9NR96 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TLR9Q9NR96 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.8■□□□□ 0.44
TLR9Q9NR96 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TLR9Q9NR96 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.8■□□□□ 0.44
TLR9Q9NR96 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TLR9Q9NR96 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TLR9Q9NR96 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TLR9Q9NR96 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TLR9Q9NR96 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.8■□□□□ 0.44
TLR9Q9NR96 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.8■□□□□ 0.44
TLR9Q9NR96 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TLR9Q9NR96 RN7SL692P-201ENST00000464677 288 ntBASIC17.8■□□□□ 0.44
TLR9Q9NR96 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.8■□□□□ 0.44
TLR9Q9NR96 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.8■□□□□ 0.44
TLR9Q9NR96 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.8■□□□□ 0.44
TLR9Q9NR96 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TLR9Q9NR96 AL596325.1-201ENST00000563991 1082 ntBASIC17.8■□□□□ 0.44
TLR9Q9NR96 AC021097.1-201ENST00000607902 574 ntBASIC17.8■□□□□ 0.44
TLR9Q9NR96 AC007967.4-201ENST00000614700 386 ntBASIC17.8■□□□□ 0.44
TLR9Q9NR96 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TLR9Q9NR96 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.8■□□□□ 0.44
TLR9Q9NR96 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.8■□□□□ 0.44
TLR9Q9NR96 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TLR9Q9NR96 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TLR9Q9NR96 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.8■□□□□ 0.44
TLR9Q9NR96 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.8■□□□□ 0.44
TLR9Q9NR96 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TLR9Q9NR96 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TLR9Q9NR96 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TLR9Q9NR96 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TLR9Q9NR96 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TLR9Q9NR96 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TLR9Q9NR96 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TLR9Q9NR96 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TLR9Q9NR96 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TLR9Q9NR96 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TLR9Q9NR96 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TLR9Q9NR96 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.79■□□□□ 0.44
TLR9Q9NR96 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TLR9Q9NR96 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TLR9Q9NR96 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms