Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 RNY4P24-201ENST00000362735 96 ntBASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 RNU1-35P-201ENST00000362782 153 ntBASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 MLANA-201ENST00000381471 1000 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 EPSTI1-203ENST00000398762 957 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 AC073316.1-205ENST00000404626 557 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 RPL17P17-201ENST00000419491 557 ntBASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 USP9YP18-201ENST00000425912 695 ntBASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 IPO7P1-201ENST00000442031 636 ntBASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 ENTPD1-AS1-209ENST00000452728 858 ntTSL 3 BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 ENTPD1-AS1-210ENST00000452942 864 ntTSL 3 BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 RPL5P32-201ENST00000454085 879 ntBASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 WBP1LP4-201ENST00000505043 344 ntBASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 STMN1P2-201ENST00000508435 439 ntBASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 RNU6-1102P-201ENST00000516149 96 ntBASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 AL121766.1-201ENST00000547436 487 ntBASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 OR7E47P-203ENST00000548970 984 ntBASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 TK2-216ENST00000564917 1156 ntTSL 3 BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 MED31-203ENST00000575197 593 ntTSL 2 BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 AC090186.1-201ENST00000605991 572 ntBASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 AL365204.3-201ENST00000612448 685 ntBASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 Z99129.1-201ENST00000612510 255 ntBASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 AL139220.2-211ENST00000628234 754 ntTSL 5 BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 IPO5-229ENST00000631030 192 ntTSL 5 BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 AL158175.1-202ENST00000635173 1194 ntTSL 5 BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 FADS2P1-201ENST00000611807 1446 ntBASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
KRTAP3-3Q9BYR6 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 RNF113A-201ENST00000371442 1353 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 AC021242.3-201ENST00000607598 1377 ntBASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 AC005342.1-201ENST00000354425 629 ntTSL 2 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 RNU6-636P-201ENST00000384598 107 ntBASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 DEFB108C-201ENST00000400154 252 ntBASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 RN7SKP33-201ENST00000410942 340 ntBASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 TP53-203ENST00000413465 1018 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 APTR-205ENST00000447009 902 ntTSL 2 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 STK24P1-201ENST00000455035 1291 ntBASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 OARD1-208ENST00000469104 704 ntTSL 2 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 RPL37P25-201ENST00000507308 276 ntBASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 CBX3P3-201ENST00000508108 532 ntBASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 AC138035.2-201ENST00000509192 727 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 AC104136.1-201ENST00000512969 394 ntBASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 AC026780.1-202ENST00000513812 572 ntTSL 2 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 OVCH1-AS1-201ENST00000549411 743 ntTSL 3 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 COX5A-205ENST00000568517 582 ntTSL 3 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 AC022146.1-201ENST00000595307 847 ntBASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 AC090181.2-201ENST00000602975 672 ntBASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 AC138473.1-201ENST00000605717 526 ntBASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC10.66□□□□□ -0.7
KRTAP3-3Q9BYR6 AL627309.1-205ENST00000610542 723 ntTSL 5 BASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms