Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.79■□□□□ 0.44
SCN4BQ8IWT1 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.79■□□□□ 0.44
SCN4BQ8IWT1 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.79■□□□□ 0.44
SCN4BQ8IWT1 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.79■□□□□ 0.44
SCN4BQ8IWT1 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SCN4BQ8IWT1 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCN4BQ8IWT1 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.79■□□□□ 0.44
SCN4BQ8IWT1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SCN4BQ8IWT1 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SCN4BQ8IWT1 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCN4BQ8IWT1 AC092068.3-201ENST00000587894 2016 ntBASIC17.79■□□□□ 0.44
SCN4BQ8IWT1 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCN4BQ8IWT1 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SCN4BQ8IWT1 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SCN4BQ8IWT1 AC131009.4-201ENST00000624048 1740 ntBASIC17.78■□□□□ 0.44
SCN4BQ8IWT1 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.78■□□□□ 0.44
SCN4BQ8IWT1 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.78■□□□□ 0.44
SCN4BQ8IWT1 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SCN4BQ8IWT1 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SCN4BQ8IWT1 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.78■□□□□ 0.44
SCN4BQ8IWT1 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SCN4BQ8IWT1 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SCN4BQ8IWT1 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.78■□□□□ 0.44
SCN4BQ8IWT1 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCN4BQ8IWT1 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.78■□□□□ 0.44
SCN4BQ8IWT1 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SCN4BQ8IWT1 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.78■□□□□ 0.44
SCN4BQ8IWT1 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.78■□□□□ 0.44
SCN4BQ8IWT1 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SCN4BQ8IWT1 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.78■□□□□ 0.44
SCN4BQ8IWT1 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.78■□□□□ 0.44
SCN4BQ8IWT1 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.78■□□□□ 0.44
SCN4BQ8IWT1 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.78■□□□□ 0.44
SCN4BQ8IWT1 MPDU1-223ENST00000582151 728 ntBASIC17.78■□□□□ 0.44
SCN4BQ8IWT1 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.78■□□□□ 0.44
SCN4BQ8IWT1 AP001350.2-201ENST00000625104 1094 ntBASIC17.78■□□□□ 0.44
SCN4BQ8IWT1 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SCN4BQ8IWT1 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SCN4BQ8IWT1 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCN4BQ8IWT1 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SCN4BQ8IWT1 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.78■□□□□ 0.44
SCN4BQ8IWT1 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCN4BQ8IWT1 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SCN4BQ8IWT1 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCN4BQ8IWT1 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCN4BQ8IWT1 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCN4BQ8IWT1 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.77■□□□□ 0.44
SCN4BQ8IWT1 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SCN4BQ8IWT1 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SCN4BQ8IWT1 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
SCN4BQ8IWT1 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCN4BQ8IWT1 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCN4BQ8IWT1 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SCN4BQ8IWT1 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SCN4BQ8IWT1 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCN4BQ8IWT1 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCN4BQ8IWT1 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCN4BQ8IWT1 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SCN4BQ8IWT1 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SCN4BQ8IWT1 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.77■□□□□ 0.44
SCN4BQ8IWT1 AL671277.1-201ENST00000429656 993 ntBASIC17.77■□□□□ 0.44
SCN4BQ8IWT1 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
SCN4BQ8IWT1 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SCN4BQ8IWT1 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.77■□□□□ 0.44
SCN4BQ8IWT1 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
SCN4BQ8IWT1 AC124947.2-201ENST00000547118 1133 ntBASIC17.77■□□□□ 0.44
SCN4BQ8IWT1 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.77■□□□□ 0.44
SCN4BQ8IWT1 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.77■□□□□ 0.44
SCN4BQ8IWT1 AC087641.1-201ENST00000557561 1021 ntBASIC17.77■□□□□ 0.44
SCN4BQ8IWT1 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.77■□□□□ 0.44
SCN4BQ8IWT1 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCN4BQ8IWT1 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCN4BQ8IWT1 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SCN4BQ8IWT1 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.77■□□□□ 0.43
SCN4BQ8IWT1 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SCN4BQ8IWT1 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
SCN4BQ8IWT1 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SCN4BQ8IWT1 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
SCN4BQ8IWT1 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.77■□□□□ 0.43
SCN4BQ8IWT1 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
SCN4BQ8IWT1 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.76■□□□□ 0.43
SCN4BQ8IWT1 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCN4BQ8IWT1 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCN4BQ8IWT1 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SCN4BQ8IWT1 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.76■□□□□ 0.43
SCN4BQ8IWT1 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCN4BQ8IWT1 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SCN4BQ8IWT1 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCN4BQ8IWT1 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCN4BQ8IWT1 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SCN4BQ8IWT1 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SCN4BQ8IWT1 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SCN4BQ8IWT1 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SCN4BQ8IWT1 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCN4BQ8IWT1 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.76■□□□□ 0.43
SCN4BQ8IWT1 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.76■□□□□ 0.43
SCN4BQ8IWT1 TIMM8BP1-201ENST00000452384 211 ntBASIC17.76■□□□□ 0.43
SCN4BQ8IWT1 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.76■□□□□ 0.43
SCN4BQ8IWT1 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.76■□□□□ 0.43
SCN4BQ8IWT1 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms