Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTC1Q2NKJ3 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CTC1Q2NKJ3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTC1Q2NKJ3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CTC1Q2NKJ3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTC1Q2NKJ3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CTC1Q2NKJ3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.03■□□□□ 0.48
CTC1Q2NKJ3 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTC1Q2NKJ3 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CTC1Q2NKJ3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.03■□□□□ 0.48
CTC1Q2NKJ3 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.03■□□□□ 0.48
CTC1Q2NKJ3 SPDYE7P-202ENST00000420373 878 ntBASIC18.03■□□□□ 0.48
CTC1Q2NKJ3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTC1Q2NKJ3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTC1Q2NKJ3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.03■□□□□ 0.48
CTC1Q2NKJ3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTC1Q2NKJ3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.03■□□□□ 0.48
CTC1Q2NKJ3 AC097493.3-201ENST00000509725 367 ntBASIC18.03■□□□□ 0.48
CTC1Q2NKJ3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.03■□□□□ 0.48
CTC1Q2NKJ3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CTC1Q2NKJ3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTC1Q2NKJ3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTC1Q2NKJ3 KRT8P23-201ENST00000560090 1207 ntBASIC18.03■□□□□ 0.48
CTC1Q2NKJ3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.03■□□□□ 0.48
CTC1Q2NKJ3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.03■□□□□ 0.48
CTC1Q2NKJ3 SPDYE22P-201ENST00000582158 798 ntBASIC18.03■□□□□ 0.48
CTC1Q2NKJ3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.03■□□□□ 0.48
CTC1Q2NKJ3 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.03■□□□□ 0.48
CTC1Q2NKJ3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.03■□□□□ 0.48
CTC1Q2NKJ3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTC1Q2NKJ3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CTC1Q2NKJ3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CTC1Q2NKJ3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CTC1Q2NKJ3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CTC1Q2NKJ3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTC1Q2NKJ3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
CTC1Q2NKJ3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.02■□□□□ 0.48
CTC1Q2NKJ3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.02■□□□□ 0.48
CTC1Q2NKJ3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTC1Q2NKJ3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
CTC1Q2NKJ3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTC1Q2NKJ3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTC1Q2NKJ3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.02■□□□□ 0.48
CTC1Q2NKJ3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CTC1Q2NKJ3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.02■□□□□ 0.48
CTC1Q2NKJ3 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CTC1Q2NKJ3 NME2P1-201ENST00000426182 414 ntBASIC18.02■□□□□ 0.48
CTC1Q2NKJ3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CTC1Q2NKJ3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
CTC1Q2NKJ3 AL512638.1-201ENST00000457493 794 ntBASIC18.02■□□□□ 0.48
CTC1Q2NKJ3 IGHV3-42-201ENST00000520410 361 ntBASIC18.02■□□□□ 0.48
CTC1Q2NKJ3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CTC1Q2NKJ3 AC107918.2-201ENST00000530817 355 ntBASIC18.02■□□□□ 0.48
CTC1Q2NKJ3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CTC1Q2NKJ3 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CTC1Q2NKJ3 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.02■□□□□ 0.48
CTC1Q2NKJ3 AC027307.3-201ENST00000594262 1100 ntBASIC18.02■□□□□ 0.48
CTC1Q2NKJ3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.48
CTC1Q2NKJ3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.02■□□□□ 0.48
CTC1Q2NKJ3 AC025048.6-201ENST00000634326 1161 ntBASIC18.02■□□□□ 0.48
CTC1Q2NKJ3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.02■□□□□ 0.48
CTC1Q2NKJ3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
CTC1Q2NKJ3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CTC1Q2NKJ3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
CTC1Q2NKJ3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CTC1Q2NKJ3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.02■□□□□ 0.47
CTC1Q2NKJ3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CTC1Q2NKJ3 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.02■□□□□ 0.47
CTC1Q2NKJ3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.02■□□□□ 0.47
CTC1Q2NKJ3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CTC1Q2NKJ3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.02■□□□□ 0.47
CTC1Q2NKJ3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
CTC1Q2NKJ3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CTC1Q2NKJ3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTC1Q2NKJ3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CTC1Q2NKJ3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTC1Q2NKJ3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.01■□□□□ 0.47
CTC1Q2NKJ3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CTC1Q2NKJ3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTC1Q2NKJ3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTC1Q2NKJ3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CTC1Q2NKJ3 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTC1Q2NKJ3 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTC1Q2NKJ3 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTC1Q2NKJ3 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CTC1Q2NKJ3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.01■□□□□ 0.47
CTC1Q2NKJ3 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.01■□□□□ 0.47
CTC1Q2NKJ3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CTC1Q2NKJ3 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CTC1Q2NKJ3 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.01■□□□□ 0.47
CTC1Q2NKJ3 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.01■□□□□ 0.47
CTC1Q2NKJ3 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CTC1Q2NKJ3 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.01■□□□□ 0.47
CTC1Q2NKJ3 AL161645.1-201ENST00000622716 1255 ntBASIC18.01■□□□□ 0.47
CTC1Q2NKJ3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CTC1Q2NKJ3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.01■□□□□ 0.47
CTC1Q2NKJ3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CTC1Q2NKJ3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CTC1Q2NKJ3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.01■□□□□ 0.47
CTC1Q2NKJ3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms