Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SSBP1Q04837 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SSBP1Q04837 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SSBP1Q04837 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
SSBP1Q04837 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SSBP1Q04837 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
SSBP1Q04837 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.33□□□□□ -0.11
SSBP1Q04837 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SSBP1Q04837 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SSBP1Q04837 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SSBP1Q04837 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.33□□□□□ -0.12
SSBP1Q04837 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.33□□□□□ -0.12
SSBP1Q04837 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSBP1Q04837 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.33□□□□□ -0.12
SSBP1Q04837 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SSBP1Q04837 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSBP1Q04837 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSBP1Q04837 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SSBP1Q04837 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSBP1Q04837 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.12
SSBP1Q04837 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.33□□□□□ -0.12
SSBP1Q04837 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.33□□□□□ -0.12
SSBP1Q04837 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.33□□□□□ -0.12
SSBP1Q04837 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSBP1Q04837 ITM2C-210ENST00000620962 501 ntBASIC14.33□□□□□ -0.12
SSBP1Q04837 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.33□□□□□ -0.12
SSBP1Q04837 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SSBP1Q04837 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SSBP1Q04837 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SSBP1Q04837 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSBP1Q04837 FAM45BP-202ENST00000592932 1624 ntBASIC14.33□□□□□ -0.12
SSBP1Q04837 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSBP1Q04837 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSBP1Q04837 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSBP1Q04837 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSBP1Q04837 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SSBP1Q04837 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP1Q04837 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SSBP1Q04837 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP1Q04837 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
SSBP1Q04837 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14.32□□□□□ -0.12
SSBP1Q04837 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP1Q04837 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.32□□□□□ -0.12
SSBP1Q04837 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP1Q04837 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP1Q04837 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
SSBP1Q04837 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP1Q04837 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SSBP1Q04837 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP1Q04837 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.32□□□□□ -0.12
SSBP1Q04837 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.32□□□□□ -0.12
SSBP1Q04837 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP1Q04837 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP1Q04837 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP1Q04837 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP1Q04837 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP1Q04837 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP1Q04837 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP1Q04837 PEX7-202ENST00000367756 680 ntTSL 3 BASIC14.32□□□□□ -0.12
SSBP1Q04837 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.32□□□□□ -0.12
SSBP1Q04837 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP1Q04837 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP1Q04837 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.32□□□□□ -0.12
SSBP1Q04837 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC14.32□□□□□ -0.12
SSBP1Q04837 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14.32□□□□□ -0.12
SSBP1Q04837 AC142381.4-202ENST00000563973 229 ntBASIC14.32□□□□□ -0.12
SSBP1Q04837 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SSBP1Q04837 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC14.32□□□□□ -0.12
SSBP1Q04837 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SSBP1Q04837 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.32□□□□□ -0.12
SSBP1Q04837 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
SSBP1Q04837 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.32□□□□□ -0.12
SSBP1Q04837 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP1Q04837 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.32□□□□□ -0.12
SSBP1Q04837 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.32□□□□□ -0.12
SSBP1Q04837 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.32□□□□□ -0.12
SSBP1Q04837 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP1Q04837 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP1Q04837 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP1Q04837 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.32□□□□□ -0.12
SSBP1Q04837 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.32□□□□□ -0.12
SSBP1Q04837 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SSBP1Q04837 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.32□□□□□ -0.12
SSBP1Q04837 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.32□□□□□ -0.12
SSBP1Q04837 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
SSBP1Q04837 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SSBP1Q04837 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP1Q04837 AC125634.1-201ENST00000438758 1403 ntBASIC14.32□□□□□ -0.12
SSBP1Q04837 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP1Q04837 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
SSBP1Q04837 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SSBP1Q04837 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSBP1Q04837 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SSBP1Q04837 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.31□□□□□ -0.12
SSBP1Q04837 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
SSBP1Q04837 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
SSBP1Q04837 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SSBP1Q04837 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSBP1Q04837 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SSBP1Q04837 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms