Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smad1P70340 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smad1P70340 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smad1P70340 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smad1P70340 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.38□□□□□ -0.11
Smad1P70340 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smad1P70340 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Smad1P70340 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smad1P70340 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smad1P70340 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smad1P70340 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smad1P70340 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smad1P70340 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smad1P70340 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smad1P70340 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smad1P70340 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smad1P70340 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smad1P70340 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smad1P70340 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.37□□□□□ -0.11
Smad1P70340 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smad1P70340 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smad1P70340 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smad1P70340 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smad1P70340 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.37□□□□□ -0.11
Smad1P70340 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.37□□□□□ -0.11
Smad1P70340 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Smad1P70340 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.37□□□□□ -0.11
Smad1P70340 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.37□□□□□ -0.11
Smad1P70340 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smad1P70340 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.37□□□□□ -0.11
Smad1P70340 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smad1P70340 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.37□□□□□ -0.11
Smad1P70340 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.37□□□□□ -0.11
Smad1P70340 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Smad1P70340 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Smad1P70340 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smad1P70340 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smad1P70340 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smad1P70340 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smad1P70340 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Smad1P70340 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smad1P70340 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Smad1P70340 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smad1P70340 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smad1P70340 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.37□□□□□ -0.11
Smad1P70340 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.37□□□□□ -0.11
Smad1P70340 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smad1P70340 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smad1P70340 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smad1P70340 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smad1P70340 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smad1P70340 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Smad1P70340 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smad1P70340 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smad1P70340 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.36□□□□□ -0.11
Smad1P70340 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smad1P70340 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smad1P70340 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smad1P70340 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smad1P70340 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smad1P70340 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smad1P70340 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smad1P70340 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Smad1P70340 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Smad1P70340 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Smad1P70340 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Smad1P70340 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Smad1P70340 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Smad1P70340 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smad1P70340 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Smad1P70340 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Smad1P70340 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smad1P70340 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.36□□□□□ -0.11
Smad1P70340 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smad1P70340 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
Smad1P70340 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smad1P70340 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.36□□□□□ -0.11
Smad1P70340 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Smad1P70340 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smad1P70340 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smad1P70340 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smad1P70340 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.35□□□□□ -0.11
Smad1P70340 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Smad1P70340 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smad1P70340 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smad1P70340 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smad1P70340 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.35□□□□□ -0.11
Smad1P70340 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smad1P70340 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smad1P70340 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smad1P70340 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.35□□□□□ -0.11
Smad1P70340 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Smad1P70340 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smad1P70340 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Smad1P70340 Gm11543-201ENSMUST00000120758 370 ntBASIC14.35□□□□□ -0.11
Smad1P70340 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.35□□□□□ -0.11
Smad1P70340 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smad1P70340 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smad1P70340 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Smad1P70340 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms