Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RHBDL3P58872 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RHBDL3P58872 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RHBDL3P58872 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RHBDL3P58872 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RHBDL3P58872 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RHBDL3P58872 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.79■□□□□ 0.76
RHBDL3P58872 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RHBDL3P58872 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RHBDL3P58872 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RHBDL3P58872 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RHBDL3P58872 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RHBDL3P58872 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.79■□□□□ 0.76
RHBDL3P58872 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RHBDL3P58872 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RHBDL3P58872 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.79■□□□□ 0.76
RHBDL3P58872 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.79■□□□□ 0.76
RHBDL3P58872 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RHBDL3P58872 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RHBDL3P58872 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.79■□□□□ 0.76
RHBDL3P58872 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.79■□□□□ 0.76
RHBDL3P58872 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.79■□□□□ 0.76
RHBDL3P58872 AC069120.2-201ENST00000524091 540 ntBASIC19.79■□□□□ 0.76
RHBDL3P58872 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.79■□□□□ 0.76
RHBDL3P58872 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.79■□□□□ 0.76
RHBDL3P58872 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.79■□□□□ 0.76
RHBDL3P58872 AC138761.1-201ENST00000584393 385 ntBASIC19.79■□□□□ 0.76
RHBDL3P58872 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RHBDL3P58872 AL390754.1-201ENST00000619088 582 ntBASIC19.79■□□□□ 0.76
RHBDL3P58872 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.79■□□□□ 0.76
RHBDL3P58872 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RHBDL3P58872 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RHBDL3P58872 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RHBDL3P58872 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RHBDL3P58872 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RHBDL3P58872 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RHBDL3P58872 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RHBDL3P58872 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.79■□□□□ 0.76
RHBDL3P58872 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RHBDL3P58872 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RHBDL3P58872 AL645608.8-201ENST00000606034 2086 ntBASIC19.79■□□□□ 0.76
RHBDL3P58872 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.79■□□□□ 0.76
RHBDL3P58872 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.78■□□□□ 0.76
RHBDL3P58872 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.78■□□□□ 0.76
RHBDL3P58872 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RHBDL3P58872 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.78■□□□□ 0.76
RHBDL3P58872 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RHBDL3P58872 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RHBDL3P58872 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RHBDL3P58872 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RHBDL3P58872 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RHBDL3P58872 AL391256.1-201ENST00000443260 1855 ntBASIC19.78■□□□□ 0.76
RHBDL3P58872 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RHBDL3P58872 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
RHBDL3P58872 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.78■□□□□ 0.76
RHBDL3P58872 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RHBDL3P58872 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
RHBDL3P58872 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.78■□□□□ 0.76
RHBDL3P58872 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.78■□□□□ 0.76
RHBDL3P58872 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.78■□□□□ 0.76
RHBDL3P58872 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.78■□□□□ 0.76
RHBDL3P58872 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.78■□□□□ 0.76
RHBDL3P58872 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.78■□□□□ 0.76
RHBDL3P58872 AL512652.2-201ENST00000625156 1716 ntBASIC19.78■□□□□ 0.76
RHBDL3P58872 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RHBDL3P58872 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RHBDL3P58872 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RHBDL3P58872 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RHBDL3P58872 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.77■□□□□ 0.76
RHBDL3P58872 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
RHBDL3P58872 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
RHBDL3P58872 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.77■□□□□ 0.76
RHBDL3P58872 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RHBDL3P58872 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RHBDL3P58872 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RHBDL3P58872 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RHBDL3P58872 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.77■□□□□ 0.76
RHBDL3P58872 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RHBDL3P58872 AL139011.1-202ENST00000642063 584 ntBASIC19.77■□□□□ 0.76
RHBDL3P58872 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RHBDL3P58872 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RHBDL3P58872 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RHBDL3P58872 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RHBDL3P58872 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RHBDL3P58872 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RHBDL3P58872 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RHBDL3P58872 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.76■□□□□ 0.75
RHBDL3P58872 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.76■□□□□ 0.75
RHBDL3P58872 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RHBDL3P58872 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RHBDL3P58872 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RHBDL3P58872 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.76■□□□□ 0.75
RHBDL3P58872 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
RHBDL3P58872 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RHBDL3P58872 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RHBDL3P58872 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RHBDL3P58872 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.76■□□□□ 0.75
RHBDL3P58872 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.76■□□□□ 0.75
RHBDL3P58872 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RHBDL3P58872 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms