Protein–RNA interactions for Protein: P55284

Cdh5, Cadherin-5, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh5P55284 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh5P55284 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh5P55284 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh5P55284 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh5P55284 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cdh5P55284 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh5P55284 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh5P55284 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh5P55284 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Cdh5P55284 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh5P55284 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh5P55284 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh5P55284 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh5P55284 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh5P55284 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Cdh5P55284 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cdh5P55284 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh5P55284 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.59□□□□□ -0.23
Cdh5P55284 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh5P55284 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.59□□□□□ -0.23
Cdh5P55284 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh5P55284 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Cdh5P55284 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh5P55284 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh5P55284 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Cdh5P55284 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh5P55284 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh5P55284 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh5P55284 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh5P55284 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.59□□□□□ -0.23
Cdh5P55284 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh5P55284 Gm27920-201ENSMUST00000183953 96 ntBASIC13.59□□□□□ -0.23
Cdh5P55284 Gm10253-201ENSMUST00000194270 940 ntBASIC13.59□□□□□ -0.23
Cdh5P55284 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh5P55284 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh5P55284 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh5P55284 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh5P55284 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh5P55284 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh5P55284 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh5P55284 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh5P55284 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh5P55284 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh5P55284 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.59□□□□□ -0.23
Cdh5P55284 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cdh5P55284 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh5P55284 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh5P55284 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Cdh5P55284 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh5P55284 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh5P55284 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh5P55284 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh5P55284 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh5P55284 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh5P55284 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cdh5P55284 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cdh5P55284 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.58□□□□□ -0.23
Cdh5P55284 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cdh5P55284 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cdh5P55284 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cdh5P55284 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh5P55284 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cdh5P55284 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh5P55284 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cdh5P55284 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Cdh5P55284 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh5P55284 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cdh5P55284 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Cdh5P55284 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh5P55284 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh5P55284 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cdh5P55284 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh5P55284 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh5P55284 Gm2810-201ENSMUST00000118681 990 ntBASIC13.58□□□□□ -0.24
Cdh5P55284 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.58□□□□□ -0.24
Cdh5P55284 Gm38225-201ENSMUST00000194001 393 ntBASIC13.58□□□□□ -0.24
Cdh5P55284 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.58□□□□□ -0.24
Cdh5P55284 Gm5779-201ENSMUST00000218467 910 ntBASIC13.58□□□□□ -0.24
Cdh5P55284 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.58□□□□□ -0.24
Cdh5P55284 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.58□□□□□ -0.24
Cdh5P55284 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.58□□□□□ -0.24
Cdh5P55284 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh5P55284 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh5P55284 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.58□□□□□ -0.24
Cdh5P55284 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh5P55284 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh5P55284 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdh5P55284 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cdh5P55284 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh5P55284 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cdh5P55284 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.57□□□□□ -0.24
Cdh5P55284 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cdh5P55284 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh5P55284 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh5P55284 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh5P55284 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Cdh5P55284 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh5P55284 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh5P55284 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh5P55284 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms