Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 SNHG9-202ENST00000564014 471 ntBASIC17.51■□□□□ 0.39
CDK5RAP1Q96SZ6 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.51■□□□□ 0.39
CDK5RAP1Q96SZ6 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.51■□□□□ 0.39
CDK5RAP1Q96SZ6 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.51■□□□□ 0.39
CDK5RAP1Q96SZ6 AP001160.2-201ENST00000596071 487 ntBASIC17.51■□□□□ 0.39
CDK5RAP1Q96SZ6 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDK5RAP1Q96SZ6 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDK5RAP1Q96SZ6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDK5RAP1Q96SZ6 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDK5RAP1Q96SZ6 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.51■□□□□ 0.39
CDK5RAP1Q96SZ6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDK5RAP1Q96SZ6 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.51■□□□□ 0.39
CDK5RAP1Q96SZ6 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDK5RAP1Q96SZ6 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.51■□□□□ 0.39
CDK5RAP1Q96SZ6 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDK5RAP1Q96SZ6 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.51■□□□□ 0.39
CDK5RAP1Q96SZ6 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 AC139713.2-201ENST00000641328 2723 ntBASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 AC021097.1-201ENST00000607902 574 ntBASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 LINC00895-201ENST00000629028 1637 ntBASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.5■□□□□ 0.39
CDK5RAP1Q96SZ6 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP1Q96SZ6 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP1Q96SZ6 AKAP8P1-201ENST00000434743 1349 ntBASIC17.49■□□□□ 0.39
CDK5RAP1Q96SZ6 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP1Q96SZ6 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.49■□□□□ 0.39
CDK5RAP1Q96SZ6 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.49■□□□□ 0.39
CDK5RAP1Q96SZ6 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP1Q96SZ6 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP1Q96SZ6 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CDK5RAP1Q96SZ6 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP1Q96SZ6 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP1Q96SZ6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP1Q96SZ6 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP1Q96SZ6 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
CDK5RAP1Q96SZ6 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP1Q96SZ6 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP1Q96SZ6 AL355306.1-201ENST00000415580 579 ntBASIC17.49■□□□□ 0.39
CDK5RAP1Q96SZ6 DNAJB3-202ENST00000449667 1266 ntBASIC17.49■□□□□ 0.39
CDK5RAP1Q96SZ6 RARRES2P8-201ENST00000566335 367 ntBASIC17.49■□□□□ 0.39
CDK5RAP1Q96SZ6 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.49■□□□□ 0.39
CDK5RAP1Q96SZ6 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.49■□□□□ 0.39
CDK5RAP1Q96SZ6 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP1Q96SZ6 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.49■□□□□ 0.39
CDK5RAP1Q96SZ6 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP1Q96SZ6 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP1Q96SZ6 AC006277.1-201ENST00000624348 1610 ntBASIC17.49■□□□□ 0.39
CDK5RAP1Q96SZ6 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP1Q96SZ6 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CDK5RAP1Q96SZ6 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.49■□□□□ 0.39
CDK5RAP1Q96SZ6 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP1Q96SZ6 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP1Q96SZ6 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDK5RAP1Q96SZ6 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CDK5RAP1Q96SZ6 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.49■□□□□ 0.39
CDK5RAP1Q96SZ6 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDK5RAP1Q96SZ6 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.48■□□□□ 0.39
CDK5RAP1Q96SZ6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDK5RAP1Q96SZ6 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDK5RAP1Q96SZ6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDK5RAP1Q96SZ6 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDK5RAP1Q96SZ6 AC092474.2-201ENST00000424288 719 ntBASIC17.48■□□□□ 0.39
CDK5RAP1Q96SZ6 RPS8P6-201ENST00000426177 609 ntBASIC17.48■□□□□ 0.39
CDK5RAP1Q96SZ6 AL671277.1-201ENST00000429656 993 ntBASIC17.48■□□□□ 0.39
CDK5RAP1Q96SZ6 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.48■□□□□ 0.39
CDK5RAP1Q96SZ6 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.48■□□□□ 0.39
CDK5RAP1Q96SZ6 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.48■□□□□ 0.39
CDK5RAP1Q96SZ6 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms