Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF25Q93038 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF25Q93038 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.12■□□□□ 0.65
TNFRSF25Q93038 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.12■□□□□ 0.65
TNFRSF25Q93038 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.12■□□□□ 0.65
TNFRSF25Q93038 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.12■□□□□ 0.65
TNFRSF25Q93038 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF25Q93038 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.12■□□□□ 0.65
TNFRSF25Q93038 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.12■□□□□ 0.65
TNFRSF25Q93038 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF25Q93038 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF25Q93038 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF25Q93038 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TNFRSF25Q93038 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF25Q93038 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TNFRSF25Q93038 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF25Q93038 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF25Q93038 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.12■□□□□ 0.65
TNFRSF25Q93038 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF25Q93038 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TNFRSF25Q93038 ZNF259P1-201ENST00000407656 1365 ntBASIC19.12■□□□□ 0.65
TNFRSF25Q93038 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF25Q93038 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.12■□□□□ 0.65
TNFRSF25Q93038 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.12■□□□□ 0.65
TNFRSF25Q93038 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.12■□□□□ 0.65
TNFRSF25Q93038 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.12■□□□□ 0.65
TNFRSF25Q93038 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.12■□□□□ 0.65
TNFRSF25Q93038 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.12■□□□□ 0.65
TNFRSF25Q93038 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.12■□□□□ 0.65
TNFRSF25Q93038 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF25Q93038 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF25Q93038 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.12■□□□□ 0.65
TNFRSF25Q93038 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF25Q93038 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TNFRSF25Q93038 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF25Q93038 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF25Q93038 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.11■□□□□ 0.65
TNFRSF25Q93038 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TNFRSF25Q93038 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF25Q93038 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF25Q93038 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF25Q93038 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF25Q93038 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF25Q93038 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
TNFRSF25Q93038 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF25Q93038 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF25Q93038 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
TNFRSF25Q93038 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.11■□□□□ 0.65
TNFRSF25Q93038 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.11■□□□□ 0.65
TNFRSF25Q93038 AP000347.1-202ENST00000435868 847 ntBASIC19.11■□□□□ 0.65
TNFRSF25Q93038 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF25Q93038 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
TNFRSF25Q93038 KRT19P2-202ENST00000557173 1012 ntBASIC19.11■□□□□ 0.65
TNFRSF25Q93038 AL031432.2-201ENST00000566714 459 ntBASIC19.11■□□□□ 0.65
TNFRSF25Q93038 AL928711.1-201ENST00000570165 459 ntBASIC19.11■□□□□ 0.65
TNFRSF25Q93038 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.11■□□□□ 0.65
TNFRSF25Q93038 AC004877.2-201ENST00000623941 599 ntBASIC19.11■□□□□ 0.65
TNFRSF25Q93038 AP001350.2-201ENST00000625104 1094 ntBASIC19.11■□□□□ 0.65
TNFRSF25Q93038 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TNFRSF25Q93038 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF25Q93038 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.11■□□□□ 0.65
TNFRSF25Q93038 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF25Q93038 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF25Q93038 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF25Q93038 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF25Q93038 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF25Q93038 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TNFRSF25Q93038 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.11■□□□□ 0.65
TNFRSF25Q93038 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.1■□□□□ 0.65
TNFRSF25Q93038 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF25Q93038 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.1■□□□□ 0.65
TNFRSF25Q93038 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.1■□□□□ 0.65
TNFRSF25Q93038 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.1■□□□□ 0.65
TNFRSF25Q93038 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF25Q93038 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TNFRSF25Q93038 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF25Q93038 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TNFRSF25Q93038 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF25Q93038 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.1■□□□□ 0.65
TNFRSF25Q93038 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.1■□□□□ 0.65
TNFRSF25Q93038 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.1■□□□□ 0.65
TNFRSF25Q93038 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.1■□□□□ 0.65
TNFRSF25Q93038 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.1■□□□□ 0.65
TNFRSF25Q93038 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.1■□□□□ 0.65
TNFRSF25Q93038 FAM197Y3-203ENST00000618346 717 ntBASIC19.1■□□□□ 0.65
TNFRSF25Q93038 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF25Q93038 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF25Q93038 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF25Q93038 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.1■□□□□ 0.65
TNFRSF25Q93038 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.1■□□□□ 0.65
TNFRSF25Q93038 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF25Q93038 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF25Q93038 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF25Q93038 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.1■□□□□ 0.65
TNFRSF25Q93038 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TNFRSF25Q93038 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
TNFRSF25Q93038 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.1■□□□□ 0.65
TNFRSF25Q93038 PCDHB19P-201ENST00000570871 2371 ntBASIC19.1■□□□□ 0.65
TNFRSF25Q93038 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
TNFRSF25Q93038 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms