Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SWSAP1Q6NVH7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SWSAP1Q6NVH7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.78■□□□□ 0.6
SWSAP1Q6NVH7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SWSAP1Q6NVH7 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SWSAP1Q6NVH7 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SWSAP1Q6NVH7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SWSAP1Q6NVH7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SWSAP1Q6NVH7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SWSAP1Q6NVH7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SWSAP1Q6NVH7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.77■□□□□ 0.6
SWSAP1Q6NVH7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SWSAP1Q6NVH7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SWSAP1Q6NVH7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SWSAP1Q6NVH7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SWSAP1Q6NVH7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SWSAP1Q6NVH7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
SWSAP1Q6NVH7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SWSAP1Q6NVH7 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SWSAP1Q6NVH7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SWSAP1Q6NVH7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SWSAP1Q6NVH7 SPDYE11-202ENST00000450699 704 ntBASIC18.77■□□□□ 0.6
SWSAP1Q6NVH7 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SWSAP1Q6NVH7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SWSAP1Q6NVH7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.77■□□□□ 0.6
SWSAP1Q6NVH7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.77■□□□□ 0.6
SWSAP1Q6NVH7 AC109635.5-201ENST00000533593 962 ntBASIC18.77■□□□□ 0.6
SWSAP1Q6NVH7 SPDYE9P-201ENST00000570642 692 ntBASIC18.77■□□□□ 0.6
SWSAP1Q6NVH7 SPDYE10P-202ENST00000612005 668 ntBASIC18.77■□□□□ 0.6
SWSAP1Q6NVH7 SPDYE8P-202ENST00000612377 668 ntBASIC18.77■□□□□ 0.6
SWSAP1Q6NVH7 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.77■□□□□ 0.6
SWSAP1Q6NVH7 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.77■□□□□ 0.6
SWSAP1Q6NVH7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
SWSAP1Q6NVH7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SWSAP1Q6NVH7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SWSAP1Q6NVH7 AC060834.1-201ENST00000443027 2032 ntBASIC18.77■□□□□ 0.6
SWSAP1Q6NVH7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SWSAP1Q6NVH7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SWSAP1Q6NVH7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
SWSAP1Q6NVH7 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SWSAP1Q6NVH7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SWSAP1Q6NVH7 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.77■□□□□ 0.59
SWSAP1Q6NVH7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SWSAP1Q6NVH7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SWSAP1Q6NVH7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SWSAP1Q6NVH7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SWSAP1Q6NVH7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SWSAP1Q6NVH7 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.76■□□□□ 0.59
SWSAP1Q6NVH7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SWSAP1Q6NVH7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SWSAP1Q6NVH7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SWSAP1Q6NVH7 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.76■□□□□ 0.59
SWSAP1Q6NVH7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SWSAP1Q6NVH7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.76■□□□□ 0.59
SWSAP1Q6NVH7 METTL21AP1-201ENST00000438852 635 ntBASIC18.76■□□□□ 0.59
SWSAP1Q6NVH7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.76■□□□□ 0.59
SWSAP1Q6NVH7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.76■□□□□ 0.59
SWSAP1Q6NVH7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.76■□□□□ 0.59
SWSAP1Q6NVH7 AC243562.1-201ENST00000560672 389 ntBASIC18.76■□□□□ 0.59
SWSAP1Q6NVH7 RARRES2P8-201ENST00000566335 367 ntBASIC18.76■□□□□ 0.59
SWSAP1Q6NVH7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.76■□□□□ 0.59
SWSAP1Q6NVH7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SWSAP1Q6NVH7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.76■□□□□ 0.59
SWSAP1Q6NVH7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.76■□□□□ 0.59
SWSAP1Q6NVH7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SWSAP1Q6NVH7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SWSAP1Q6NVH7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SWSAP1Q6NVH7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SWSAP1Q6NVH7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
SWSAP1Q6NVH7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.76■□□□□ 0.59
SWSAP1Q6NVH7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SWSAP1Q6NVH7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.76■□□□□ 0.59
SWSAP1Q6NVH7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SWSAP1Q6NVH7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SWSAP1Q6NVH7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.75■□□□□ 0.59
SWSAP1Q6NVH7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SWSAP1Q6NVH7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SWSAP1Q6NVH7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.75■□□□□ 0.59
SWSAP1Q6NVH7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SWSAP1Q6NVH7 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.75■□□□□ 0.59
SWSAP1Q6NVH7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SWSAP1Q6NVH7 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SWSAP1Q6NVH7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SWSAP1Q6NVH7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.75■□□□□ 0.59
SWSAP1Q6NVH7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SWSAP1Q6NVH7 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SWSAP1Q6NVH7 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.75■□□□□ 0.59
SWSAP1Q6NVH7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SWSAP1Q6NVH7 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SWSAP1Q6NVH7 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.75■□□□□ 0.59
SWSAP1Q6NVH7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SWSAP1Q6NVH7 PMS2P4-201ENST00000412466 1052 ntBASIC18.75■□□□□ 0.59
SWSAP1Q6NVH7 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.75■□□□□ 0.59
SWSAP1Q6NVH7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.75■□□□□ 0.59
SWSAP1Q6NVH7 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SWSAP1Q6NVH7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.75■□□□□ 0.59
SWSAP1Q6NVH7 AL135744.1-201ENST00000565098 629 ntBASIC18.75■□□□□ 0.59
SWSAP1Q6NVH7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SWSAP1Q6NVH7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
SWSAP1Q6NVH7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms