Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CL1P78423 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CL1P78423 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CX3CL1P78423 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CL1P78423 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CL1P78423 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CX3CL1P78423 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.68□□□□□ -0.22
CX3CL1P78423 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CX3CL1P78423 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC13.68□□□□□ -0.22
CX3CL1P78423 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CX3CL1P78423 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CX3CL1P78423 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.68□□□□□ -0.22
CX3CL1P78423 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CX3CL1P78423 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CX3CL1P78423 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC13.68□□□□□ -0.22
CX3CL1P78423 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CX3CL1P78423 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CX3CL1P78423 EGFEM1P-202ENST00000431685 1563 ntBASIC13.68□□□□□ -0.22
CX3CL1P78423 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.68□□□□□ -0.22
CX3CL1P78423 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CX3CL1P78423 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CX3CL1P78423 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CX3CL1P78423 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CX3CL1P78423 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.68□□□□□ -0.22
CX3CL1P78423 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.68□□□□□ -0.22
CX3CL1P78423 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC13.68□□□□□ -0.22
CX3CL1P78423 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC13.68□□□□□ -0.22
CX3CL1P78423 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.68□□□□□ -0.22
CX3CL1P78423 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CX3CL1P78423 RN7SL510P-201ENST00000581311 263 ntBASIC13.68□□□□□ -0.22
CX3CL1P78423 MTDHP4-201ENST00000600287 670 ntBASIC13.68□□□□□ -0.22
CX3CL1P78423 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.68□□□□□ -0.22
CX3CL1P78423 IRF5-214ENST00000613821 595 ntTSL 5 BASIC13.68□□□□□ -0.22
CX3CL1P78423 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.68□□□□□ -0.22
CX3CL1P78423 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.68□□□□□ -0.22
CX3CL1P78423 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CX3CL1P78423 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CX3CL1P78423 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CX3CL1P78423 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
CX3CL1P78423 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CX3CL1P78423 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CX3CL1P78423 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CX3CL1P78423 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CX3CL1P78423 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CX3CL1P78423 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.68□□□□□ -0.22
CX3CL1P78423 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CX3CL1P78423 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CX3CL1P78423 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CX3CL1P78423 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CL1P78423 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CL1P78423 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
CX3CL1P78423 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CL1P78423 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CL1P78423 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.67□□□□□ -0.22
CX3CL1P78423 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CL1P78423 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CL1P78423 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CL1P78423 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.67□□□□□ -0.22
CX3CL1P78423 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.67□□□□□ -0.22
CX3CL1P78423 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.67□□□□□ -0.22
CX3CL1P78423 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CL1P78423 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CX3CL1P78423 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CL1P78423 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CL1P78423 AC004870.1-201ENST00000315132 882 ntBASIC13.67□□□□□ -0.22
CX3CL1P78423 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.67□□□□□ -0.22
CX3CL1P78423 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CX3CL1P78423 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.67□□□□□ -0.22
CX3CL1P78423 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.67□□□□□ -0.22
CX3CL1P78423 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CL1P78423 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CL1P78423 AC064862.7-201ENST00000604520 867 ntBASIC13.67□□□□□ -0.22
CX3CL1P78423 AL589182.2-201ENST00000619332 1049 ntBASIC13.67□□□□□ -0.22
CX3CL1P78423 AL691432.3-201ENST00000621860 400 ntBASIC13.67□□□□□ -0.22
CX3CL1P78423 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CX3CL1P78423 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CL1P78423 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CL1P78423 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CX3CL1P78423 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CL1P78423 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC13.67□□□□□ -0.22
CX3CL1P78423 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CL1P78423 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CL1P78423 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CL1P78423 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CL1P78423 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13.67□□□□□ -0.22
CX3CL1P78423 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CL1P78423 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CL1P78423 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CL1P78423 PCDHA1-201ENST00000378133 2726 ntBASIC13.67□□□□□ -0.22
CX3CL1P78423 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CL1P78423 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CL1P78423 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CL1P78423 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CL1P78423 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CX3CL1P78423 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CL1P78423 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CL1P78423 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CX3CL1P78423 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CX3CL1P78423 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.66□□□□□ -0.22
CX3CL1P78423 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms