Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.03■□□□□ 0.64
TPM4P67936 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.03■□□□□ 0.64
TPM4P67936 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM4P67936 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TPM4P67936 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM4P67936 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TPM4P67936 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
TPM4P67936 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
TPM4P67936 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM4P67936 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19.02■□□□□ 0.64
TPM4P67936 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TPM4P67936 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM4P67936 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
TPM4P67936 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.02■□□□□ 0.64
TPM4P67936 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.02■□□□□ 0.64
TPM4P67936 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM4P67936 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
TPM4P67936 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM4P67936 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.02■□□□□ 0.64
TPM4P67936 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.64
TPM4P67936 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.02■□□□□ 0.64
TPM4P67936 HOMER2P1-201ENST00000455653 964 ntBASIC19.02■□□□□ 0.64
TPM4P67936 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TPM4P67936 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.02■□□□□ 0.64
TPM4P67936 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TPM4P67936 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.02■□□□□ 0.64
TPM4P67936 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.02■□□□□ 0.64
TPM4P67936 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.02■□□□□ 0.64
TPM4P67936 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TPM4P67936 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TPM4P67936 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TPM4P67936 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.02■□□□□ 0.64
TPM4P67936 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM4P67936 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM4P67936 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TPM4P67936 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
TPM4P67936 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TPM4P67936 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
TPM4P67936 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TPM4P67936 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TPM4P67936 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
TPM4P67936 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC19.01■□□□□ 0.63
TPM4P67936 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.01■□□□□ 0.63
TPM4P67936 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TPM4P67936 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM4P67936 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC19.01■□□□□ 0.63
TPM4P67936 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM4P67936 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM4P67936 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.01■□□□□ 0.63
TPM4P67936 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.01■□□□□ 0.63
TPM4P67936 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM4P67936 AC003669.1-201ENST00000334569 611 ntBASIC19.01■□□□□ 0.63
TPM4P67936 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TPM4P67936 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TPM4P67936 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM4P67936 YBX1P2-201ENST00000489612 999 ntBASIC19.01■□□□□ 0.63
TPM4P67936 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.01■□□□□ 0.63
TPM4P67936 AC010203.1-204ENST00000548782 407 ntBASIC19.01■□□□□ 0.63
TPM4P67936 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TPM4P67936 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TPM4P67936 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TPM4P67936 AL353593.2-201ENST00000602529 1483 ntBASIC19.01■□□□□ 0.63
TPM4P67936 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.01■□□□□ 0.63
TPM4P67936 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TPM4P67936 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TPM4P67936 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TPM4P67936 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.01■□□□□ 0.63
TPM4P67936 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC19.01■□□□□ 0.63
TPM4P67936 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TPM4P67936 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TPM4P67936 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TPM4P67936 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TPM4P67936 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM4P67936 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM4P67936 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19■□□□□ 0.63
TPM4P67936 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
TPM4P67936 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TPM4P67936 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC19■□□□□ 0.63
TPM4P67936 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM4P67936 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM4P67936 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19■□□□□ 0.63
TPM4P67936 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM4P67936 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19■□□□□ 0.63
TPM4P67936 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19■□□□□ 0.63
TPM4P67936 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
TPM4P67936 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19■□□□□ 0.63
TPM4P67936 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
TPM4P67936 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19■□□□□ 0.63
TPM4P67936 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19■□□□□ 0.63
TPM4P67936 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM4P67936 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19■□□□□ 0.63
TPM4P67936 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19■□□□□ 0.63
TPM4P67936 AC139887.4-201ENST00000607877 719 ntBASIC19■□□□□ 0.63
TPM4P67936 AC073912.3-201ENST00000624414 853 ntBASIC19■□□□□ 0.63
TPM4P67936 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19■□□□□ 0.63
TPM4P67936 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19■□□□□ 0.63
TPM4P67936 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19■□□□□ 0.63
TPM4P67936 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM4P67936 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TPM4P67936 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms