Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RXRBP28702 MIR33B-201ENST00000385104 96 ntBASIC21.8■■□□□ 1.08
RXRBP28702 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RXRBP28702 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC21.8■■□□□ 1.08
RXRBP28702 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
RXRBP28702 SCARNA20.5-201ENST00000516991 142 ntBASIC21.8■■□□□ 1.08
RXRBP28702 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC21.8■■□□□ 1.08
RXRBP28702 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC21.8■■□□□ 1.08
RXRBP28702 AC025048.3-201ENST00000590609 569 ntBASIC21.8■■□□□ 1.08
RXRBP28702 ATF5-205ENST00000600336 682 ntTSL 2 BASIC21.8■■□□□ 1.08
RXRBP28702 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC21.8■■□□□ 1.08
RXRBP28702 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
RXRBP28702 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC21.8■■□□□ 1.08
RXRBP28702 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RXRBP28702 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC21.8■■□□□ 1.08
RXRBP28702 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RXRBP28702 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
RXRBP28702 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RXRBP28702 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.79■■□□□ 1.08
RXRBP28702 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RXRBP28702 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RXRBP28702 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RXRBP28702 AL355334.1-201ENST00000417713 215 ntBASIC21.79■■□□□ 1.08
RXRBP28702 FNTAP2-201ENST00000430308 634 ntBASIC21.79■■□□□ 1.08
RXRBP28702 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
RXRBP28702 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RXRBP28702 PTP4A1P2-201ENST00000546033 454 ntBASIC21.79■■□□□ 1.08
RXRBP28702 QPRT-203ENST00000562473 579 ntTSL 3 BASIC21.79■■□□□ 1.08
RXRBP28702 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RXRBP28702 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC21.79■■□□□ 1.08
RXRBP28702 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RXRBP28702 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.79■■□□□ 1.08
RXRBP28702 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
RXRBP28702 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RXRBP28702 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC21.79■■□□□ 1.08
RXRBP28702 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC21.78■■□□□ 1.08
RXRBP28702 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC21.78■■□□□ 1.08
RXRBP28702 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RXRBP28702 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RXRBP28702 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RXRBP28702 AC091046.1-201ENST00000331871 207 ntBASIC21.78■■□□□ 1.08
RXRBP28702 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RXRBP28702 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC21.78■■□□□ 1.08
RXRBP28702 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
RXRBP28702 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC21.78■■□□□ 1.08
RXRBP28702 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RXRBP28702 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RXRBP28702 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC21.78■■□□□ 1.08
RXRBP28702 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC21.78■■□□□ 1.08
RXRBP28702 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC21.78■■□□□ 1.08
RXRBP28702 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RXRBP28702 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC21.78■■□□□ 1.08
RXRBP28702 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC21.78■■□□□ 1.08
RXRBP28702 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RXRBP28702 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RXRBP28702 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RXRBP28702 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RXRBP28702 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
RXRBP28702 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RXRBP28702 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RXRBP28702 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RXRBP28702 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RXRBP28702 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RXRBP28702 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.77■■□□□ 1.08
RXRBP28702 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RXRBP28702 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.77■■□□□ 1.08
RXRBP28702 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RXRBP28702 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RXRBP28702 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
RXRBP28702 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RXRBP28702 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RXRBP28702 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RXRBP28702 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
RXRBP28702 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
RXRBP28702 AL442647.2-201ENST00000429864 857 ntBASIC21.77■■□□□ 1.08
RXRBP28702 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC21.77■■□□□ 1.08
RXRBP28702 AL355864.2-201ENST00000447420 863 ntBASIC21.77■■□□□ 1.08
RXRBP28702 RN7SL399P-201ENST00000471648 279 ntBASIC21.77■■□□□ 1.08
RXRBP28702 FTH1P14-201ENST00000482930 551 ntBASIC21.77■■□□□ 1.08
RXRBP28702 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC21.77■■□□□ 1.08
RXRBP28702 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RXRBP28702 AC068587.3-201ENST00000526613 355 ntBASIC21.77■■□□□ 1.08
RXRBP28702 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RXRBP28702 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC21.77■■□□□ 1.08
RXRBP28702 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC21.77■■□□□ 1.08
RXRBP28702 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
RXRBP28702 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC21.77■■□□□ 1.08
RXRBP28702 PRKN-211ENST00000615065 261 ntTSL 5 BASIC21.77■■□□□ 1.08
RXRBP28702 AL008638.5-201ENST00000623814 1298 ntBASIC21.77■■□□□ 1.08
RXRBP28702 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RXRBP28702 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC21.77■■□□□ 1.08
RXRBP28702 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.76■■□□□ 1.07
RXRBP28702 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC21.76■■□□□ 1.07
RXRBP28702 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
RXRBP28702 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
RXRBP28702 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
RXRBP28702 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RXRBP28702 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
RXRBP28702 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RXRBP28702 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms