Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTN3O95197 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
RTN3O95197 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.84■□□□□ 0.45
RTN3O95197 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
RTN3O95197 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTN3O95197 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTN3O95197 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.83■□□□□ 0.45
RTN3O95197 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTN3O95197 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
RTN3O95197 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
RTN3O95197 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RTN3O95197 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTN3O95197 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTN3O95197 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.83■□□□□ 0.45
RTN3O95197 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTN3O95197 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTN3O95197 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.83■□□□□ 0.45
RTN3O95197 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTN3O95197 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTN3O95197 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTN3O95197 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.83■□□□□ 0.45
RTN3O95197 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.83■□□□□ 0.44
RTN3O95197 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
RTN3O95197 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RTN3O95197 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTN3O95197 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTN3O95197 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTN3O95197 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTN3O95197 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
RTN3O95197 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.83■□□□□ 0.44
RTN3O95197 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
RTN3O95197 MKNK2P1-201ENST00000437526 628 ntBASIC17.83■□□□□ 0.44
RTN3O95197 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RTN3O95197 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.83■□□□□ 0.44
RTN3O95197 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RTN3O95197 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RTN3O95197 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.83■□□□□ 0.44
RTN3O95197 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.83■□□□□ 0.44
RTN3O95197 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.83■□□□□ 0.44
RTN3O95197 AL645728.2-201ENST00000641974 660 ntBASIC17.83■□□□□ 0.44
RTN3O95197 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RTN3O95197 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RTN3O95197 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
RTN3O95197 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTN3O95197 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RTN3O95197 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.44
RTN3O95197 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RTN3O95197 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
RTN3O95197 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTN3O95197 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RTN3O95197 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
RTN3O95197 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTN3O95197 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTN3O95197 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.82■□□□□ 0.44
RTN3O95197 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.82■□□□□ 0.44
RTN3O95197 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RTN3O95197 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RTN3O95197 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RTN3O95197 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RTN3O95197 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.82■□□□□ 0.44
RTN3O95197 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
RTN3O95197 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTN3O95197 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTN3O95197 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTN3O95197 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTN3O95197 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.82■□□□□ 0.44
RTN3O95197 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.82■□□□□ 0.44
RTN3O95197 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
RTN3O95197 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.82■□□□□ 0.44
RTN3O95197 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
RTN3O95197 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
RTN3O95197 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.82■□□□□ 0.44
RTN3O95197 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.82■□□□□ 0.44
RTN3O95197 AC068137.2-201ENST00000605408 478 ntBASIC17.82■□□□□ 0.44
RTN3O95197 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RTN3O95197 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RTN3O95197 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
RTN3O95197 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.82■□□□□ 0.44
RTN3O95197 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RTN3O95197 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTN3O95197 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTN3O95197 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RTN3O95197 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.82■□□□□ 0.44
RTN3O95197 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RTN3O95197 AL118508.1-201ENST00000613502 2345 ntBASIC17.82■□□□□ 0.44
RTN3O95197 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTN3O95197 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.82■□□□□ 0.44
RTN3O95197 FRMD8P1-201ENST00000440433 1524 ntBASIC17.82■□□□□ 0.44
RTN3O95197 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTN3O95197 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RTN3O95197 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RTN3O95197 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTN3O95197 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RTN3O95197 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RTN3O95197 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RTN3O95197 LINC02012-201ENST00000608206 1725 ntBASIC17.81■□□□□ 0.44
RTN3O95197 TOP3BP1-201ENST00000420768 1380 ntBASIC17.81■□□□□ 0.44
RTN3O95197 AL021920.2-201ENST00000624828 1351 ntBASIC17.81■□□□□ 0.44
RTN3O95197 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RTN3O95197 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms