Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 AC026120.1-201ENST00000611536 926 ntBASIC16.79■□□□□ 0.28
PCDHGA12O60330 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.79■□□□□ 0.28
PCDHGA12O60330 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHGA12O60330 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHGA12O60330 AC022211.2-201ENST00000585075 2527 ntBASIC16.79■□□□□ 0.28
PCDHGA12O60330 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA12O60330 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA12O60330 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
PCDHGA12O60330 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA12O60330 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.79■□□□□ 0.28
PCDHGA12O60330 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PCDHGA12O60330 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA12O60330 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA12O60330 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA12O60330 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PCDHGA12O60330 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA12O60330 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA12O60330 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGA12O60330 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA12O60330 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA12O60330 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA12O60330 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGA12O60330 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA12O60330 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA12O60330 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PCDHGA12O60330 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA12O60330 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHGA12O60330 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA12O60330 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA12O60330 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA12O60330 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA12O60330 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHGA12O60330 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA12O60330 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA12O60330 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
PCDHGA12O60330 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA12O60330 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA12O60330 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA12O60330 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA12O60330 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA12O60330 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA12O60330 AC092474.2-201ENST00000424288 719 ntBASIC16.78■□□□□ 0.28
PCDHGA12O60330 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDHGA12O60330 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHGA12O60330 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHGA12O60330 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.78■□□□□ 0.28
PCDHGA12O60330 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDHGA12O60330 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDHGA12O60330 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA12O60330 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA12O60330 AC239800.4-201ENST00000603712 296 ntBASIC16.78■□□□□ 0.28
PCDHGA12O60330 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHGA12O60330 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA12O60330 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDHGA12O60330 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PCDHGA12O60330 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGA12O60330 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDHGA12O60330 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA12O60330 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA12O60330 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA12O60330 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA12O60330 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA12O60330 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA12O60330 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA12O60330 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
PCDHGA12O60330 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA12O60330 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PCDHGA12O60330 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGA12O60330 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
PCDHGA12O60330 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA12O60330 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
PCDHGA12O60330 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA12O60330 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHGA12O60330 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA12O60330 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA12O60330 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA12O60330 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
PCDHGA12O60330 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA12O60330 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA12O60330 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
PCDHGA12O60330 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA12O60330 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA12O60330 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGA12O60330 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGA12O60330 AL355306.1-201ENST00000415580 579 ntBASIC16.77■□□□□ 0.28
PCDHGA12O60330 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHGA12O60330 TIMM8BP1-201ENST00000452384 211 ntBASIC16.77■□□□□ 0.28
PCDHGA12O60330 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA12O60330 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGA12O60330 RNA5SP421-201ENST00000516864 134 ntBASIC16.77■□□□□ 0.28
PCDHGA12O60330 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGA12O60330 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.77■□□□□ 0.28
PCDHGA12O60330 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHGA12O60330 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHGA12O60330 AL645728.2-201ENST00000641974 660 ntBASIC16.77■□□□□ 0.28
PCDHGA12O60330 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGA12O60330 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGA12O60330 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGA12O60330 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGA12O60330 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms