Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CHD2O14647 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHD2O14647 PC-204ENST00000524491 1714 ntTSL 2 BASIC23.1■■□□□ 1.29
CHD2O14647 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
CHD2O14647 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CHD2O14647 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHD2O14647 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
CHD2O14647 RAD18-204ENST00000418463 563 ntTSL 4 BASIC23.1■■□□□ 1.29
CHD2O14647 RAD18-205ENST00000421052 582 ntTSL 3 BASIC23.1■■□□□ 1.29
CHD2O14647 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC23.1■■□□□ 1.29
CHD2O14647 PFAS-212ENST00000625942 396 ntTSL 5 BASIC23.1■■□□□ 1.29
CHD2O14647 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CHD2O14647 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHD2O14647 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
CHD2O14647 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CHD2O14647 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
CHD2O14647 AC012317.2-201ENST00000623305 2251 ntBASIC23.09■■□□□ 1.29
CHD2O14647 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHD2O14647 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHD2O14647 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHD2O14647 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
CHD2O14647 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC23.09■■□□□ 1.29
CHD2O14647 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC23.09■■□□□ 1.29
CHD2O14647 AC099548.2-209ENST00000480264 625 ntBASIC23.09■■□□□ 1.29
CHD2O14647 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC23.09■■□□□ 1.29
CHD2O14647 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC23.09■■□□□ 1.29
CHD2O14647 AC013467.2-201ENST00000605472 835 ntBASIC23.09■■□□□ 1.29
CHD2O14647 MIR8072-201ENST00000614241 80 ntBASIC23.09■■□□□ 1.29
CHD2O14647 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHD2O14647 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHD2O14647 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC23.09■■□□□ 1.29
CHD2O14647 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHD2O14647 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC23.09■■□□□ 1.29
CHD2O14647 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHD2O14647 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
CHD2O14647 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CHD2O14647 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CHD2O14647 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
CHD2O14647 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
CHD2O14647 PDIA3P1-201ENST00000471856 1510 ntBASIC23.08■■□□□ 1.29
CHD2O14647 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CHD2O14647 AL671710.1-201ENST00000610245 2349 ntBASIC23.08■■□□□ 1.29
CHD2O14647 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC23.08■■□□□ 1.29
CHD2O14647 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC23.08■■□□□ 1.29
CHD2O14647 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC23.08■■□□□ 1.29
CHD2O14647 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC23.08■■□□□ 1.29
CHD2O14647 RPS24-214ENST00000613865 538 ntTSL 5 BASIC23.08■■□□□ 1.29
CHD2O14647 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC23.08■■□□□ 1.29
CHD2O14647 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC23.08■■□□□ 1.29
CHD2O14647 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CHD2O14647 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CHD2O14647 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
CHD2O14647 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CHD2O14647 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC23.08■■□□□ 1.29
CHD2O14647 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CHD2O14647 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC23.08■■□□□ 1.28
CHD2O14647 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
CHD2O14647 DPM2-202ENST00000373110 738 ntTSL 2 BASIC23.08■■□□□ 1.28
CHD2O14647 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CHD2O14647 MEP1AP4-201ENST00000423244 1087 ntBASIC23.08■■□□□ 1.28
CHD2O14647 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CHD2O14647 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC23.08■■□□□ 1.28
CHD2O14647 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC23.08■■□□□ 1.28
CHD2O14647 GPR182-203ENST00000622922 591 ntBASIC23.08■■□□□ 1.28
CHD2O14647 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CHD2O14647 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CHD2O14647 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC23.07■■□□□ 1.28
CHD2O14647 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC23.07■■□□□ 1.28
CHD2O14647 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC23.07■■□□□ 1.28
CHD2O14647 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHD2O14647 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CHD2O14647 ABALON-201ENST00000629058 1903 ntBASIC23.07■■□□□ 1.28
CHD2O14647 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHD2O14647 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHD2O14647 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CHD2O14647 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC23.07■■□□□ 1.28
CHD2O14647 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHD2O14647 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CHD2O14647 SDHAP3-202ENST00000515467 728 ntBASIC23.07■■□□□ 1.28
CHD2O14647 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC23.07■■□□□ 1.28
CHD2O14647 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC23.07■■□□□ 1.28
CHD2O14647 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CHD2O14647 AC068587.10-201ENST00000641210 219 ntBASIC23.07■■□□□ 1.28
CHD2O14647 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CHD2O14647 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
CHD2O14647 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC23.07■■□□□ 1.28
CHD2O14647 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CHD2O14647 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CHD2O14647 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CHD2O14647 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CHD2O14647 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CHD2O14647 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CHD2O14647 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
CHD2O14647 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CHD2O14647 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC23.06■■□□□ 1.28
CHD2O14647 PAM16-204ENST00000571941 674 ntTSL 3 BASIC23.06■■□□□ 1.28
CHD2O14647 MIR6869-201ENST00000619434 62 ntBASIC23.06■■□□□ 1.28
CHD2O14647 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CHD2O14647 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CHD2O14647 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms