Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH9Q9ULB4 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CDH9Q9ULB4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH9Q9ULB4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CDH9Q9ULB4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDH9Q9ULB4 AC060834.1-201ENST00000443027 2032 ntBASIC17.84■□□□□ 0.45
CDH9Q9ULB4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDH9Q9ULB4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH9Q9ULB4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.84■□□□□ 0.45
CDH9Q9ULB4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.84■□□□□ 0.45
CDH9Q9ULB4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.84■□□□□ 0.45
CDH9Q9ULB4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH9Q9ULB4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDH9Q9ULB4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.84■□□□□ 0.45
CDH9Q9ULB4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH9Q9ULB4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.84■□□□□ 0.45
CDH9Q9ULB4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.84■□□□□ 0.45
CDH9Q9ULB4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.84■□□□□ 0.45
CDH9Q9ULB4 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.84■□□□□ 0.45
CDH9Q9ULB4 RPS8P6-201ENST00000426177 609 ntBASIC17.84■□□□□ 0.45
CDH9Q9ULB4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.84■□□□□ 0.45
CDH9Q9ULB4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDH9Q9ULB4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.84■□□□□ 0.45
CDH9Q9ULB4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CDH9Q9ULB4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.84■□□□□ 0.45
CDH9Q9ULB4 AL031055.1-201ENST00000606362 631 ntBASIC17.84■□□□□ 0.45
CDH9Q9ULB4 AC099522.2-201ENST00000607001 744 ntBASIC17.84■□□□□ 0.45
CDH9Q9ULB4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.84■□□□□ 0.45
CDH9Q9ULB4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH9Q9ULB4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH9Q9ULB4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH9Q9ULB4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH9Q9ULB4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH9Q9ULB4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
CDH9Q9ULB4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH9Q9ULB4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.84■□□□□ 0.45
CDH9Q9ULB4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDH9Q9ULB4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDH9Q9ULB4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
CDH9Q9ULB4 FZD10-202ENST00000539839 3282 ntBASIC17.83■□□□□ 0.45
CDH9Q9ULB4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
CDH9Q9ULB4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDH9Q9ULB4 AC006277.1-201ENST00000624348 1610 ntBASIC17.83■□□□□ 0.45
CDH9Q9ULB4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
CDH9Q9ULB4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
CDH9Q9ULB4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CDH9Q9ULB4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CDH9Q9ULB4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDH9Q9ULB4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CDH9Q9ULB4 AP001094.4-201ENST00000579008 2176 ntBASIC17.83■□□□□ 0.45
CDH9Q9ULB4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CDH9Q9ULB4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDH9Q9ULB4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH9Q9ULB4 PMS2P4-201ENST00000412466 1052 ntBASIC17.83■□□□□ 0.44
CDH9Q9ULB4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDH9Q9ULB4 AC254562.1-201ENST00000417586 456 ntBASIC17.83■□□□□ 0.44
CDH9Q9ULB4 AC092474.2-201ENST00000424288 719 ntBASIC17.83■□□□□ 0.44
CDH9Q9ULB4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.83■□□□□ 0.44
CDH9Q9ULB4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.83■□□□□ 0.44
CDH9Q9ULB4 DNAJB3-202ENST00000449667 1266 ntBASIC17.83■□□□□ 0.44
CDH9Q9ULB4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.83■□□□□ 0.44
CDH9Q9ULB4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.83■□□□□ 0.44
CDH9Q9ULB4 AP002490.2-201ENST00000524791 560 ntBASIC17.83■□□□□ 0.44
CDH9Q9ULB4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.83■□□□□ 0.44
CDH9Q9ULB4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.83■□□□□ 0.44
CDH9Q9ULB4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.83■□□□□ 0.44
CDH9Q9ULB4 AP001160.2-201ENST00000596071 487 ntBASIC17.83■□□□□ 0.44
CDH9Q9ULB4 AL161645.1-201ENST00000622716 1255 ntBASIC17.83■□□□□ 0.44
CDH9Q9ULB4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.83■□□□□ 0.44
CDH9Q9ULB4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH9Q9ULB4 PCDHB17P-201ENST00000539533 2393 ntBASIC17.83■□□□□ 0.44
CDH9Q9ULB4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.83■□□□□ 0.44
CDH9Q9ULB4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.83■□□□□ 0.44
CDH9Q9ULB4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDH9Q9ULB4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH9Q9ULB4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.83■□□□□ 0.44
CDH9Q9ULB4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDH9Q9ULB4 LINC00895-201ENST00000629028 1637 ntBASIC17.83■□□□□ 0.44
CDH9Q9ULB4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH9Q9ULB4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH9Q9ULB4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.83■□□□□ 0.44
CDH9Q9ULB4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.83■□□□□ 0.44
CDH9Q9ULB4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH9Q9ULB4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH9Q9ULB4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CDH9Q9ULB4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH9Q9ULB4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH9Q9ULB4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH9Q9ULB4 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH9Q9ULB4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH9Q9ULB4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
CDH9Q9ULB4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CDH9Q9ULB4 AL355306.1-201ENST00000415580 579 ntBASIC17.82■□□□□ 0.44
CDH9Q9ULB4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.82■□□□□ 0.44
CDH9Q9ULB4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.82■□□□□ 0.44
CDH9Q9ULB4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.82■□□□□ 0.44
CDH9Q9ULB4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH9Q9ULB4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CDH9Q9ULB4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.82■□□□□ 0.44
CDH9Q9ULB4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms