Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HACD3Q9P035 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HACD3Q9P035 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HACD3Q9P035 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.17■□□□□ 0.34
HACD3Q9P035 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.17■□□□□ 0.34
HACD3Q9P035 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.17■□□□□ 0.34
HACD3Q9P035 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.17■□□□□ 0.34
HACD3Q9P035 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HACD3Q9P035 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HACD3Q9P035 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HACD3Q9P035 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.17■□□□□ 0.34
HACD3Q9P035 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.17■□□□□ 0.34
HACD3Q9P035 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.17■□□□□ 0.34
HACD3Q9P035 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HACD3Q9P035 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.17■□□□□ 0.34
HACD3Q9P035 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.17■□□□□ 0.34
HACD3Q9P035 TERC-201ENST00000602385 541 ntBASIC17.17■□□□□ 0.34
HACD3Q9P035 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
HACD3Q9P035 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
HACD3Q9P035 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HACD3Q9P035 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HACD3Q9P035 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.17■□□□□ 0.34
HACD3Q9P035 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HACD3Q9P035 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.17■□□□□ 0.34
HACD3Q9P035 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HACD3Q9P035 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.17■□□□□ 0.34
HACD3Q9P035 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HACD3Q9P035 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
HACD3Q9P035 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HACD3Q9P035 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HACD3Q9P035 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HACD3Q9P035 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.16■□□□□ 0.34
HACD3Q9P035 AC243591.1-201ENST00000452967 1364 ntBASIC17.16■□□□□ 0.34
HACD3Q9P035 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HACD3Q9P035 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HACD3Q9P035 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.16■□□□□ 0.34
HACD3Q9P035 AC006504.4-201ENST00000592118 1568 ntBASIC17.16■□□□□ 0.34
HACD3Q9P035 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
HACD3Q9P035 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
HACD3Q9P035 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.16■□□□□ 0.34
HACD3Q9P035 AC073621.1-201ENST00000392730 636 ntBASIC17.16■□□□□ 0.34
HACD3Q9P035 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.16■□□□□ 0.34
HACD3Q9P035 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HACD3Q9P035 HNRNPDP1-201ENST00000439535 754 ntBASIC17.16■□□□□ 0.34
HACD3Q9P035 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.16■□□□□ 0.34
HACD3Q9P035 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.16■□□□□ 0.34
HACD3Q9P035 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.16■□□□□ 0.34
HACD3Q9P035 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.16■□□□□ 0.34
HACD3Q9P035 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
HACD3Q9P035 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HACD3Q9P035 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HACD3Q9P035 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HACD3Q9P035 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HACD3Q9P035 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HACD3Q9P035 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.16■□□□□ 0.34
HACD3Q9P035 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HACD3Q9P035 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HACD3Q9P035 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HACD3Q9P035 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HACD3Q9P035 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.16■□□□□ 0.34
HACD3Q9P035 TUBB8P12-201ENST00000308911 1335 ntBASIC17.16■□□□□ 0.34
HACD3Q9P035 TUBB7P-202ENST00000428444 1305 ntBASIC17.16■□□□□ 0.34
HACD3Q9P035 TUBB8P7-204ENST00000567960 1332 ntBASIC17.16■□□□□ 0.34
HACD3Q9P035 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
HACD3Q9P035 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HACD3Q9P035 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HACD3Q9P035 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
HACD3Q9P035 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HACD3Q9P035 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HACD3Q9P035 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HACD3Q9P035 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.15■□□□□ 0.34
HACD3Q9P035 AC092053.1-201ENST00000605787 1936 ntBASIC17.15■□□□□ 0.34
HACD3Q9P035 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.15■□□□□ 0.34
HACD3Q9P035 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HACD3Q9P035 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.15■□□□□ 0.34
HACD3Q9P035 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HACD3Q9P035 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HACD3Q9P035 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
HACD3Q9P035 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HACD3Q9P035 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HACD3Q9P035 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HACD3Q9P035 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HACD3Q9P035 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.15■□□□□ 0.34
HACD3Q9P035 PTCHD3P3-201ENST00000403073 906 ntBASIC17.15■□□□□ 0.34
HACD3Q9P035 AL031284.1-201ENST00000419297 478 ntBASIC17.15■□□□□ 0.34
HACD3Q9P035 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.15■□□□□ 0.34
HACD3Q9P035 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HACD3Q9P035 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.15■□□□□ 0.34
HACD3Q9P035 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.15■□□□□ 0.34
HACD3Q9P035 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.15■□□□□ 0.34
HACD3Q9P035 AC093909.1-201ENST00000504731 1122 ntBASIC17.15■□□□□ 0.34
HACD3Q9P035 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
HACD3Q9P035 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.15■□□□□ 0.34
HACD3Q9P035 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.15■□□□□ 0.34
HACD3Q9P035 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HACD3Q9P035 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HACD3Q9P035 GGTLC5P-201ENST00000617623 998 ntBASIC17.15■□□□□ 0.34
HACD3Q9P035 FAM215A-202ENST00000632077 792 ntBASIC17.15■□□□□ 0.34
HACD3Q9P035 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HACD3Q9P035 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms