Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC40Q9H9A6 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRC40Q9H9A6 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC40Q9H9A6 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.22■□□□□ 0.35
LRRC40Q9H9A6 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC40Q9H9A6 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC40Q9H9A6 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC40Q9H9A6 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 LINC00895-201ENST00000629028 1637 ntBASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 AL391256.1-201ENST00000443260 1855 ntBASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 PAWRP1-201ENST00000451083 565 ntBASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 AC006557.2-201ENST00000592985 1240 ntBASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRC40Q9H9A6 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
LRRC40Q9H9A6 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LRRC40Q9H9A6 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.21■□□□□ 0.34
LRRC40Q9H9A6 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.21■□□□□ 0.34
LRRC40Q9H9A6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LRRC40Q9H9A6 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.21■□□□□ 0.34
LRRC40Q9H9A6 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 AC107918.4-202ENST00000641623 219 ntBASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 AF228730.7-201ENST00000641842 219 ntBASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 AC092171.3-201ENST00000610122 2651 ntBASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC40Q9H9A6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC40Q9H9A6 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC40Q9H9A6 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
LRRC40Q9H9A6 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
LRRC40Q9H9A6 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
LRRC40Q9H9A6 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC40Q9H9A6 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC40Q9H9A6 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms