Protein–RNA interactions for Protein: Q6P2D8

XRRA1, X-ray radiation resistance-associated protein 1, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRRA1Q6P2D8 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
XRRA1Q6P2D8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.9■□□□□ 0.62
XRRA1Q6P2D8 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
XRRA1Q6P2D8 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
XRRA1Q6P2D8 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
XRRA1Q6P2D8 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
XRRA1Q6P2D8 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
XRRA1Q6P2D8 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
XRRA1Q6P2D8 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.9■□□□□ 0.62
XRRA1Q6P2D8 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.9■□□□□ 0.62
XRRA1Q6P2D8 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
XRRA1Q6P2D8 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.9■□□□□ 0.62
XRRA1Q6P2D8 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.9■□□□□ 0.62
XRRA1Q6P2D8 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.9■□□□□ 0.62
XRRA1Q6P2D8 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.9■□□□□ 0.62
XRRA1Q6P2D8 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.9■□□□□ 0.62
XRRA1Q6P2D8 KRT18P34-201ENST00000488218 1270 ntBASIC18.9■□□□□ 0.62
XRRA1Q6P2D8 RFPL4AP1-201ENST00000530883 850 ntBASIC18.9■□□□□ 0.62
XRRA1Q6P2D8 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.9■□□□□ 0.62
XRRA1Q6P2D8 AL512356.2-201ENST00000546955 174 ntBASIC18.9■□□□□ 0.62
XRRA1Q6P2D8 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.9■□□□□ 0.62
XRRA1Q6P2D8 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.9■□□□□ 0.62
XRRA1Q6P2D8 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.9■□□□□ 0.62
XRRA1Q6P2D8 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
XRRA1Q6P2D8 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
XRRA1Q6P2D8 PCDHB17P-201ENST00000539533 2393 ntBASIC18.9■□□□□ 0.62
XRRA1Q6P2D8 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
XRRA1Q6P2D8 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
XRRA1Q6P2D8 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.9■□□□□ 0.62
XRRA1Q6P2D8 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
XRRA1Q6P2D8 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
XRRA1Q6P2D8 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
XRRA1Q6P2D8 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
XRRA1Q6P2D8 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.89■□□□□ 0.62
XRRA1Q6P2D8 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
XRRA1Q6P2D8 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.89■□□□□ 0.61
XRRA1Q6P2D8 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
XRRA1Q6P2D8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
XRRA1Q6P2D8 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.89■□□□□ 0.61
XRRA1Q6P2D8 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
XRRA1Q6P2D8 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.89■□□□□ 0.61
XRRA1Q6P2D8 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
XRRA1Q6P2D8 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
XRRA1Q6P2D8 MIR346-201ENST00000362234 95 ntBASIC18.89■□□□□ 0.61
XRRA1Q6P2D8 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.89■□□□□ 0.61
XRRA1Q6P2D8 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.89■□□□□ 0.61
XRRA1Q6P2D8 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.89■□□□□ 0.61
XRRA1Q6P2D8 KRT18P32-201ENST00000424695 1287 ntBASIC18.89■□□□□ 0.61
XRRA1Q6P2D8 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.89■□□□□ 0.61
XRRA1Q6P2D8 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
XRRA1Q6P2D8 AC004449.1-201ENST00000564240 433 ntBASIC18.89■□□□□ 0.61
XRRA1Q6P2D8 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.89■□□□□ 0.61
XRRA1Q6P2D8 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.89■□□□□ 0.61
XRRA1Q6P2D8 AC015911.4-201ENST00000588022 1070 ntBASIC18.89■□□□□ 0.61
XRRA1Q6P2D8 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.89■□□□□ 0.61
XRRA1Q6P2D8 LINC00628-201ENST00000628516 1289 ntBASIC18.89■□□□□ 0.61
XRRA1Q6P2D8 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
XRRA1Q6P2D8 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.89■□□□□ 0.61
XRRA1Q6P2D8 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
XRRA1Q6P2D8 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
XRRA1Q6P2D8 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
XRRA1Q6P2D8 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
XRRA1Q6P2D8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
XRRA1Q6P2D8 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.61
XRRA1Q6P2D8 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.89■□□□□ 0.61
XRRA1Q6P2D8 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.89■□□□□ 0.61
XRRA1Q6P2D8 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
XRRA1Q6P2D8 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
XRRA1Q6P2D8 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
XRRA1Q6P2D8 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
XRRA1Q6P2D8 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
XRRA1Q6P2D8 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.88■□□□□ 0.61
XRRA1Q6P2D8 SNX33P1-201ENST00000592116 1762 ntBASIC18.88■□□□□ 0.61
XRRA1Q6P2D8 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
XRRA1Q6P2D8 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
XRRA1Q6P2D8 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
XRRA1Q6P2D8 AL645608.8-201ENST00000606034 2086 ntBASIC18.88■□□□□ 0.61
XRRA1Q6P2D8 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
XRRA1Q6P2D8 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
XRRA1Q6P2D8 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
XRRA1Q6P2D8 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.88■□□□□ 0.61
XRRA1Q6P2D8 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.88■□□□□ 0.61
XRRA1Q6P2D8 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.88■□□□□ 0.61
XRRA1Q6P2D8 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
XRRA1Q6P2D8 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
XRRA1Q6P2D8 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
XRRA1Q6P2D8 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.88■□□□□ 0.61
XRRA1Q6P2D8 AC027307.2-201ENST00000591252 911 ntBASIC18.88■□□□□ 0.61
XRRA1Q6P2D8 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
XRRA1Q6P2D8 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.88■□□□□ 0.61
XRRA1Q6P2D8 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.88■□□□□ 0.61
XRRA1Q6P2D8 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
XRRA1Q6P2D8 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
XRRA1Q6P2D8 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
XRRA1Q6P2D8 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
XRRA1Q6P2D8 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
XRRA1Q6P2D8 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
XRRA1Q6P2D8 AL391256.1-201ENST00000443260 1855 ntBASIC18.88■□□□□ 0.61
XRRA1Q6P2D8 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
XRRA1Q6P2D8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms