Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPS4XP62701 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPS4XP62701 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.31■□□□□ 0.04
RPS4XP62701 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.31■□□□□ 0.04
RPS4XP62701 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.31■□□□□ 0.04
RPS4XP62701 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPS4XP62701 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPS4XP62701 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.31■□□□□ 0.04
RPS4XP62701 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPS4XP62701 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPS4XP62701 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPS4XP62701 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPS4XP62701 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RPS4XP62701 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPS4XP62701 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
RPS4XP62701 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.31■□□□□ 0.04
RPS4XP62701 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.31■□□□□ 0.04
RPS4XP62701 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPS4XP62701 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RPS4XP62701 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPS4XP62701 BX005266.1-201ENST00000473402 457 ntBASIC15.31■□□□□ 0.04
RPS4XP62701 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
RPS4XP62701 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.31■□□□□ 0.04
RPS4XP62701 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.31■□□□□ 0.04
RPS4XP62701 AC106730.1-201ENST00000566722 1090 ntBASIC15.31■□□□□ 0.04
RPS4XP62701 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.31■□□□□ 0.04
RPS4XP62701 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
RPS4XP62701 TERC-201ENST00000602385 541 ntBASIC15.31■□□□□ 0.04
RPS4XP62701 MIR7706-201ENST00000613747 67 ntBASIC15.31■□□□□ 0.04
RPS4XP62701 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPS4XP62701 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPS4XP62701 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.31■□□□□ 0.04
RPS4XP62701 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPS4XP62701 AC243591.1-201ENST00000452967 1364 ntBASIC15.31■□□□□ 0.04
RPS4XP62701 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPS4XP62701 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPS4XP62701 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPS4XP62701 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RPS4XP62701 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.31■□□□□ 0.04
RPS4XP62701 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPS4XP62701 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPS4XP62701 AL391256.1-201ENST00000443260 1855 ntBASIC15.31■□□□□ 0.04
RPS4XP62701 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RPS4XP62701 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RPS4XP62701 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.31■□□□□ 0.04
RPS4XP62701 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RPS4XP62701 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
RPS4XP62701 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPS4XP62701 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPS4XP62701 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RPS4XP62701 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.3■□□□□ 0.04
RPS4XP62701 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPS4XP62701 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RPS4XP62701 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPS4XP62701 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPS4XP62701 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RPS4XP62701 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RPS4XP62701 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPS4XP62701 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPS4XP62701 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RPS4XP62701 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.3■□□□□ 0.04
RPS4XP62701 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RPS4XP62701 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPS4XP62701 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RPS4XP62701 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RPS4XP62701 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
RPS4XP62701 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPS4XP62701 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.3■□□□□ 0.04
RPS4XP62701 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RPS4XP62701 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.3■□□□□ 0.04
RPS4XP62701 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.3■□□□□ 0.04
RPS4XP62701 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.3■□□□□ 0.04
RPS4XP62701 KRT8P49-201ENST00000604166 1432 ntBASIC15.3■□□□□ 0.04
RPS4XP62701 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.3■□□□□ 0.04
RPS4XP62701 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.3■□□□□ 0.04
RPS4XP62701 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.3■□□□□ 0.04
RPS4XP62701 FAM215A-202ENST00000632077 792 ntBASIC15.3■□□□□ 0.04
RPS4XP62701 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.3■□□□□ 0.04
RPS4XP62701 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RPS4XP62701 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPS4XP62701 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RPS4XP62701 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RPS4XP62701 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPS4XP62701 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RPS4XP62701 AL356309.3-201ENST00000624132 1934 ntBASIC15.29■□□□□ 0.04
RPS4XP62701 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
RPS4XP62701 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPS4XP62701 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPS4XP62701 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RPS4XP62701 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPS4XP62701 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RPS4XP62701 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RPS4XP62701 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.29■□□□□ 0.04
RPS4XP62701 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPS4XP62701 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.29■□□□□ 0.04
RPS4XP62701 RPL13AP23-201ENST00000480739 586 ntBASIC15.29■□□□□ 0.04
RPS4XP62701 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
RPS4XP62701 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.29■□□□□ 0.04
RPS4XP62701 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
RPS4XP62701 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms