Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.22■□□□□ 0.19
VSX2P58304 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VSX2P58304 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.22■□□□□ 0.19
VSX2P58304 AC092865.5-201ENST00000545435 363 ntBASIC16.22■□□□□ 0.19
VSX2P58304 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.22■□□□□ 0.19
VSX2P58304 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.22■□□□□ 0.19
VSX2P58304 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VSX2P58304 AC004877.2-201ENST00000623941 599 ntBASIC16.22■□□□□ 0.19
VSX2P58304 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VSX2P58304 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
VSX2P58304 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VSX2P58304 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.22■□□□□ 0.19
VSX2P58304 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VSX2P58304 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
VSX2P58304 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VSX2P58304 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
VSX2P58304 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.22■□□□□ 0.19
VSX2P58304 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.22■□□□□ 0.19
VSX2P58304 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
VSX2P58304 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VSX2P58304 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
VSX2P58304 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.22■□□□□ 0.19
VSX2P58304 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
VSX2P58304 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VSX2P58304 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VSX2P58304 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.22■□□□□ 0.19
VSX2P58304 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
VSX2P58304 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VSX2P58304 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
VSX2P58304 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
VSX2P58304 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VSX2P58304 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VSX2P58304 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VSX2P58304 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VSX2P58304 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VSX2P58304 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VSX2P58304 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
VSX2P58304 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VSX2P58304 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
VSX2P58304 BX842568.4-201ENST00000421222 227 ntBASIC16.21■□□□□ 0.19
VSX2P58304 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.21■□□□□ 0.19
VSX2P58304 FAM185BP-201ENST00000443595 716 ntBASIC16.21■□□□□ 0.19
VSX2P58304 AL513480.1-201ENST00000451731 511 ntBASIC16.21■□□□□ 0.19
VSX2P58304 AC107918.2-201ENST00000530817 355 ntBASIC16.21■□□□□ 0.19
VSX2P58304 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
VSX2P58304 AC002347.1-201ENST00000569543 541 ntBASIC16.21■□□□□ 0.19
VSX2P58304 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.21■□□□□ 0.19
VSX2P58304 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.21■□□□□ 0.19
VSX2P58304 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
VSX2P58304 AC023511.2-201ENST00000618803 211 ntBASIC16.21■□□□□ 0.19
VSX2P58304 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.21■□□□□ 0.19
VSX2P58304 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.21■□□□□ 0.19
VSX2P58304 AC092865.6-201ENST00000642101 219 ntBASIC16.21■□□□□ 0.19
VSX2P58304 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VSX2P58304 AC008894.3-201ENST00000624324 3103 ntBASIC16.21■□□□□ 0.19
VSX2P58304 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VSX2P58304 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
VSX2P58304 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VSX2P58304 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
VSX2P58304 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VSX2P58304 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VSX2P58304 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.21■□□□□ 0.18
VSX2P58304 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
VSX2P58304 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
VSX2P58304 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
VSX2P58304 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.21■□□□□ 0.18
VSX2P58304 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
VSX2P58304 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
VSX2P58304 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
VSX2P58304 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
VSX2P58304 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
VSX2P58304 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VSX2P58304 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
VSX2P58304 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.2■□□□□ 0.18
VSX2P58304 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.2■□□□□ 0.18
VSX2P58304 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VSX2P58304 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.2■□□□□ 0.18
VSX2P58304 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VSX2P58304 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
VSX2P58304 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
VSX2P58304 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
VSX2P58304 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VSX2P58304 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VSX2P58304 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VSX2P58304 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
VSX2P58304 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VSX2P58304 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.2■□□□□ 0.18
VSX2P58304 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
VSX2P58304 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.2■□□□□ 0.18
VSX2P58304 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.2■□□□□ 0.18
VSX2P58304 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
VSX2P58304 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
VSX2P58304 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.2■□□□□ 0.18
VSX2P58304 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.2■□□□□ 0.18
VSX2P58304 ACTL9-202ENST00000612068 1252 ntBASIC16.2■□□□□ 0.18
VSX2P58304 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.2■□□□□ 0.18
VSX2P58304 AL513190.1-201ENST00000621254 727 ntBASIC16.2■□□□□ 0.18
VSX2P58304 AC007064.4-201ENST00000637740 555 ntBASIC16.2■□□□□ 0.18
VSX2P58304 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
VSX2P58304 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms