Protein–RNA interactions for Protein: P33897

ABCD1, ATP-binding cassette sub-family D member 1, humanhuman

Predictions only

Length 745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD1P33897 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ABCD1P33897 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
ABCD1P33897 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
ABCD1P33897 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.49■□□□□ 0.55
ABCD1P33897 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.49■□□□□ 0.55
ABCD1P33897 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.49■□□□□ 0.55
ABCD1P33897 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.49■□□□□ 0.55
ABCD1P33897 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ABCD1P33897 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ABCD1P33897 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
ABCD1P33897 AL391256.1-201ENST00000443260 1855 ntBASIC18.49■□□□□ 0.55
ABCD1P33897 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ABCD1P33897 PCDHB17P-201ENST00000539533 2393 ntBASIC18.49■□□□□ 0.55
ABCD1P33897 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.49■□□□□ 0.55
ABCD1P33897 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ABCD1P33897 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.49■□□□□ 0.55
ABCD1P33897 OR6D1P-203ENST00000641209 4860 ntBASIC18.49■□□□□ 0.55
ABCD1P33897 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ABCD1P33897 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ABCD1P33897 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.49■□□□□ 0.55
ABCD1P33897 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.49■□□□□ 0.55
ABCD1P33897 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
ABCD1P33897 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ABCD1P33897 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.48■□□□□ 0.55
ABCD1P33897 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ABCD1P33897 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ABCD1P33897 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ABCD1P33897 SLC22A20-204ENST00000530038 1673 ntBASIC18.48■□□□□ 0.55
ABCD1P33897 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ABCD1P33897 AC105020.1-201ENST00000435356 2205 ntBASIC18.48■□□□□ 0.55
ABCD1P33897 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ABCD1P33897 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.48■□□□□ 0.55
ABCD1P33897 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.48■□□□□ 0.55
ABCD1P33897 PMS2P4-201ENST00000412466 1052 ntBASIC18.48■□□□□ 0.55
ABCD1P33897 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.48■□□□□ 0.55
ABCD1P33897 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.48■□□□□ 0.55
ABCD1P33897 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ABCD1P33897 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ABCD1P33897 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.48■□□□□ 0.55
ABCD1P33897 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.48■□□□□ 0.55
ABCD1P33897 PDPK2P-202ENST00000562415 1191 ntBASIC18.48■□□□□ 0.55
ABCD1P33897 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.48■□□□□ 0.55
ABCD1P33897 CYP2A7P1-201ENST00000595391 815 ntBASIC18.48■□□□□ 0.55
ABCD1P33897 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.48■□□□□ 0.55
ABCD1P33897 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ABCD1P33897 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ABCD1P33897 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ABCD1P33897 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ABCD1P33897 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.48■□□□□ 0.55
ABCD1P33897 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.48■□□□□ 0.55
ABCD1P33897 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ABCD1P33897 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ABCD1P33897 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.48■□□□□ 0.55
ABCD1P33897 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ABCD1P33897 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ABCD1P33897 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.48■□□□□ 0.55
ABCD1P33897 PMS2P7-201ENST00000506558 1336 ntBASIC18.48■□□□□ 0.55
ABCD1P33897 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.48■□□□□ 0.55
ABCD1P33897 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ABCD1P33897 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD1P33897 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD1P33897 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD1P33897 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD1P33897 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ABCD1P33897 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD1P33897 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD1P33897 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD1P33897 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD1P33897 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD1P33897 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD1P33897 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
ABCD1P33897 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.47■□□□□ 0.55
ABCD1P33897 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.47■□□□□ 0.55
ABCD1P33897 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.47■□□□□ 0.55
ABCD1P33897 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.47■□□□□ 0.55
ABCD1P33897 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.47■□□□□ 0.55
ABCD1P33897 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.47■□□□□ 0.55
ABCD1P33897 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.47■□□□□ 0.55
ABCD1P33897 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD1P33897 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.47■□□□□ 0.55
ABCD1P33897 AC002347.1-201ENST00000569543 541 ntBASIC18.47■□□□□ 0.55
ABCD1P33897 AC004877.2-201ENST00000623941 599 ntBASIC18.47■□□□□ 0.55
ABCD1P33897 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.47■□□□□ 0.55
ABCD1P33897 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD1P33897 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.47■□□□□ 0.55
ABCD1P33897 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD1P33897 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD1P33897 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.47■□□□□ 0.55
ABCD1P33897 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD1P33897 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.47■□□□□ 0.55
ABCD1P33897 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
ABCD1P33897 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD1P33897 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD1P33897 BCAR1-209ENST00000546196 1340 ntBASIC18.47■□□□□ 0.55
ABCD1P33897 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD1P33897 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD1P33897 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ABCD1P33897 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ABCD1P33897 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ABCD1P33897 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms