Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
THRAP10827 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
THRAP10827 ZNF259P1-201ENST00000407656 1365 ntBASIC17.06■□□□□ 0.32
THRAP10827 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
THRAP10827 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
THRAP10827 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
THRAP10827 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
THRAP10827 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.06■□□□□ 0.32
THRAP10827 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
THRAP10827 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
THRAP10827 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.06■□□□□ 0.32
THRAP10827 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
THRAP10827 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
THRAP10827 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.06■□□□□ 0.32
THRAP10827 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.06■□□□□ 0.32
THRAP10827 NKAPP1-205ENST00000585790 367 ntBASIC17.06■□□□□ 0.32
THRAP10827 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
THRAP10827 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
THRAP10827 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
THRAP10827 AL596257.1-201ENST00000641463 2694 ntBASIC17.06■□□□□ 0.32
THRAP10827 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
THRAP10827 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.06■□□□□ 0.32
THRAP10827 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
THRAP10827 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
THRAP10827 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
THRAP10827 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
THRAP10827 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.06■□□□□ 0.32
THRAP10827 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
THRAP10827 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
THRAP10827 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
THRAP10827 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
THRAP10827 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.06■□□□□ 0.32
THRAP10827 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
THRAP10827 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
THRAP10827 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.06■□□□□ 0.32
THRAP10827 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
THRAP10827 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
THRAP10827 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
THRAP10827 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
THRAP10827 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
THRAP10827 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
THRAP10827 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.05■□□□□ 0.32
THRAP10827 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
THRAP10827 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
THRAP10827 KRT8P47-201ENST00000604727 1398 ntBASIC17.05■□□□□ 0.32
THRAP10827 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
THRAP10827 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
THRAP10827 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
THRAP10827 AC116353.5-201ENST00000638148 1699 ntBASIC17.05■□□□□ 0.32
THRAP10827 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
THRAP10827 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.05■□□□□ 0.32
THRAP10827 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
THRAP10827 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
THRAP10827 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.05■□□□□ 0.32
THRAP10827 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
THRAP10827 AC122714.2-201ENST00000502787 707 ntBASIC17.05■□□□□ 0.32
THRAP10827 IGHV3-22-201ENST00000520721 359 ntBASIC17.05■□□□□ 0.32
THRAP10827 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.05■□□□□ 0.32
THRAP10827 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
THRAP10827 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.05■□□□□ 0.32
THRAP10827 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.05■□□□□ 0.32
THRAP10827 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.05■□□□□ 0.32
THRAP10827 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.05■□□□□ 0.32
THRAP10827 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.05■□□□□ 0.32
THRAP10827 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
THRAP10827 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
THRAP10827 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
THRAP10827 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
THRAP10827 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
THRAP10827 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
THRAP10827 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
THRAP10827 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
THRAP10827 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
THRAP10827 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
THRAP10827 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
THRAP10827 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
THRAP10827 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
THRAP10827 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.04■□□□□ 0.32
THRAP10827 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
THRAP10827 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
THRAP10827 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.04■□□□□ 0.32
THRAP10827 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
THRAP10827 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
THRAP10827 AC010460.3-201ENST00000511359 1579 ntBASIC17.04■□□□□ 0.32
THRAP10827 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
THRAP10827 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.04■□□□□ 0.32
THRAP10827 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.04■□□□□ 0.32
THRAP10827 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.04■□□□□ 0.32
THRAP10827 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
THRAP10827 POLD2P1-201ENST00000511220 997 ntBASIC17.04■□□□□ 0.32
THRAP10827 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
THRAP10827 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.04■□□□□ 0.32
THRAP10827 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.04■□□□□ 0.32
THRAP10827 AC145285.3-201ENST00000564603 959 ntBASIC17.04■□□□□ 0.32
THRAP10827 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
THRAP10827 MTDHP4-201ENST00000600287 670 ntBASIC17.04■□□□□ 0.32
THRAP10827 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
THRAP10827 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
THRAP10827 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.04■□□□□ 0.32
THRAP10827 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms