Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
MBD4O95243 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
MBD4O95243 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.15■□□□□ 0.82
MBD4O95243 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
MBD4O95243 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.82
MBD4O95243 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
MBD4O95243 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
MBD4O95243 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
MBD4O95243 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
MBD4O95243 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.14■□□□□ 0.82
MBD4O95243 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
MBD4O95243 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
MBD4O95243 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
MBD4O95243 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
MBD4O95243 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
MBD4O95243 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MBD4O95243 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
MBD4O95243 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MBD4O95243 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC20.14■□□□□ 0.81
MBD4O95243 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
MBD4O95243 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
MBD4O95243 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
MBD4O95243 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
MBD4O95243 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MBD4O95243 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MBD4O95243 RNU1-129P-201ENST00000384064 167 ntBASIC20.14■□□□□ 0.81
MBD4O95243 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
MBD4O95243 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
MBD4O95243 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC20.14■□□□□ 0.81
MBD4O95243 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.14■□□□□ 0.81
MBD4O95243 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.14■□□□□ 0.81
MBD4O95243 U1.21-201ENST00000580816 167 ntBASIC20.14■□□□□ 0.81
MBD4O95243 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.14■□□□□ 0.81
MBD4O95243 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MBD4O95243 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC20.14■□□□□ 0.81
MBD4O95243 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.14■□□□□ 0.81
MBD4O95243 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
MBD4O95243 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MBD4O95243 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.14■□□□□ 0.81
MBD4O95243 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MBD4O95243 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
MBD4O95243 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MBD4O95243 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
MBD4O95243 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
MBD4O95243 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
MBD4O95243 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MBD4O95243 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
MBD4O95243 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
MBD4O95243 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MBD4O95243 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
MBD4O95243 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MBD4O95243 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC20.13■□□□□ 0.81
MBD4O95243 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MBD4O95243 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
MBD4O95243 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MBD4O95243 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC20.13■□□□□ 0.81
MBD4O95243 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MBD4O95243 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
MBD4O95243 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MBD4O95243 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MBD4O95243 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MBD4O95243 AC002056.1-201ENST00000395613 760 ntBASIC20.13■□□□□ 0.81
MBD4O95243 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MBD4O95243 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MBD4O95243 DNAJB3-202ENST00000449667 1266 ntBASIC20.13■□□□□ 0.81
MBD4O95243 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MBD4O95243 IGHV3OR16-6-201ENST00000568775 360 ntBASIC20.13■□□□□ 0.81
MBD4O95243 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.13■□□□□ 0.81
MBD4O95243 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.13■□□□□ 0.81
MBD4O95243 AL009183.1-201ENST00000603760 355 ntBASIC20.13■□□□□ 0.81
MBD4O95243 AL031055.1-201ENST00000606362 631 ntBASIC20.13■□□□□ 0.81
MBD4O95243 AP001350.2-201ENST00000625104 1094 ntBASIC20.13■□□□□ 0.81
MBD4O95243 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MBD4O95243 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MBD4O95243 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
MBD4O95243 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC20.13■□□□□ 0.81
MBD4O95243 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
MBD4O95243 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
MBD4O95243 AC080080.1-201ENST00000625121 2420 ntBASIC20.13■□□□□ 0.81
MBD4O95243 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
MBD4O95243 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MBD4O95243 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.13■□□□□ 0.81
MBD4O95243 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MBD4O95243 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
MBD4O95243 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MBD4O95243 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MBD4O95243 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MBD4O95243 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.12■□□□□ 0.81
MBD4O95243 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MBD4O95243 AC005915.1-201ENST00000624912 2018 ntBASIC20.12■□□□□ 0.81
MBD4O95243 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
MBD4O95243 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC20.12■□□□□ 0.81
MBD4O95243 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
MBD4O95243 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
MBD4O95243 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
MBD4O95243 OR6D1P-202ENST00000641007 5290 ntBASIC20.12■□□□□ 0.81
MBD4O95243 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
MBD4O95243 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MBD4O95243 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MBD4O95243 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms