Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NDUFS3O75489 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
NDUFS3O75489 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.92■□□□□ 0.3
NDUFS3O75489 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.92■□□□□ 0.3
NDUFS3O75489 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.92■□□□□ 0.3
NDUFS3O75489 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.92■□□□□ 0.3
NDUFS3O75489 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.92■□□□□ 0.3
NDUFS3O75489 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.92■□□□□ 0.3
NDUFS3O75489 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
NDUFS3O75489 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
NDUFS3O75489 AC107918.4-202ENST00000641623 219 ntBASIC16.92■□□□□ 0.3
NDUFS3O75489 RNF216P1-203ENST00000404404 2427 ntBASIC16.92■□□□□ 0.3
NDUFS3O75489 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NDUFS3O75489 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NDUFS3O75489 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NDUFS3O75489 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
NDUFS3O75489 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.92■□□□□ 0.3
NDUFS3O75489 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
NDUFS3O75489 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NDUFS3O75489 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.92■□□□□ 0.3
NDUFS3O75489 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.91■□□□□ 0.3
NDUFS3O75489 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFS3O75489 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.91■□□□□ 0.3
NDUFS3O75489 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFS3O75489 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
NDUFS3O75489 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFS3O75489 FLJ38576-201ENST00000623820 2459 ntBASIC16.91■□□□□ 0.3
NDUFS3O75489 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFS3O75489 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.91■□□□□ 0.3
NDUFS3O75489 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFS3O75489 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFS3O75489 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.91■□□□□ 0.3
NDUFS3O75489 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.91■□□□□ 0.3
NDUFS3O75489 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.91■□□□□ 0.3
NDUFS3O75489 RPS2P1-201ENST00000434010 821 ntBASIC16.91■□□□□ 0.3
NDUFS3O75489 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFS3O75489 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFS3O75489 RNPS1P1-201ENST00000507437 918 ntBASIC16.91■□□□□ 0.3
NDUFS3O75489 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.91■□□□□ 0.3
NDUFS3O75489 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.91■□□□□ 0.3
NDUFS3O75489 OR7E14P-202ENST00000530490 1290 ntBASIC16.91■□□□□ 0.3
NDUFS3O75489 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.91■□□□□ 0.3
NDUFS3O75489 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
NDUFS3O75489 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.91■□□□□ 0.3
NDUFS3O75489 AL121912.1-201ENST00000603683 238 ntBASIC16.91■□□□□ 0.3
NDUFS3O75489 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.91■□□□□ 0.3
NDUFS3O75489 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
NDUFS3O75489 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFS3O75489 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
NDUFS3O75489 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFS3O75489 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.91■□□□□ 0.3
NDUFS3O75489 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFS3O75489 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFS3O75489 AC099398.1-201ENST00000567919 2776 ntBASIC16.91■□□□□ 0.3
NDUFS3O75489 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFS3O75489 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFS3O75489 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.91■□□□□ 0.3
NDUFS3O75489 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFS3O75489 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
NDUFS3O75489 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFS3O75489 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
NDUFS3O75489 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.91■□□□□ 0.3
NDUFS3O75489 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.91■□□□□ 0.3
NDUFS3O75489 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFS3O75489 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.9■□□□□ 0.3
NDUFS3O75489 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFS3O75489 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFS3O75489 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.9■□□□□ 0.3
NDUFS3O75489 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
NDUFS3O75489 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
NDUFS3O75489 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFS3O75489 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFS3O75489 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
NDUFS3O75489 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFS3O75489 AC078925.2-201ENST00000624013 1973 ntBASIC16.9■□□□□ 0.3
NDUFS3O75489 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFS3O75489 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFS3O75489 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFS3O75489 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.9■□□□□ 0.3
NDUFS3O75489 PTCHD3P3-201ENST00000403073 906 ntBASIC16.9■□□□□ 0.3
NDUFS3O75489 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.9■□□□□ 0.3
NDUFS3O75489 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.9■□□□□ 0.3
NDUFS3O75489 FAM197Y8-203ENST00000450145 560 ntBASIC16.9■□□□□ 0.3
NDUFS3O75489 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.9■□□□□ 0.3
NDUFS3O75489 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFS3O75489 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFS3O75489 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.9■□□□□ 0.3
NDUFS3O75489 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.9■□□□□ 0.3
NDUFS3O75489 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.9■□□□□ 0.3
NDUFS3O75489 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFS3O75489 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFS3O75489 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
NDUFS3O75489 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFS3O75489 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.9■□□□□ 0.3
NDUFS3O75489 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFS3O75489 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFS3O75489 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFS3O75489 PI4KAP1-204ENST00000612579 1703 ntBASIC16.9■□□□□ 0.3
NDUFS3O75489 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFS3O75489 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms