Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ube4bQ9ES00 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ube4bQ9ES00 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ube4bQ9ES00 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.81■□□□□ 0.92
Ube4bQ9ES00 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ube4bQ9ES00 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.81■□□□□ 0.92
Ube4bQ9ES00 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ube4bQ9ES00 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Ube4bQ9ES00 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ube4bQ9ES00 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ube4bQ9ES00 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ube4bQ9ES00 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Ube4bQ9ES00 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ube4bQ9ES00 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ube4bQ9ES00 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ube4bQ9ES00 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Ube4bQ9ES00 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ube4bQ9ES00 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ube4bQ9ES00 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ube4bQ9ES00 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
Ube4bQ9ES00 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ube4bQ9ES00 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ube4bQ9ES00 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ube4bQ9ES00 Gm30023-201ENSMUST00000197970 889 ntBASIC20.78■□□□□ 0.92
Ube4bQ9ES00 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Ube4bQ9ES00 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ube4bQ9ES00 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Ube4bQ9ES00 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Ube4bQ9ES00 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ube4bQ9ES00 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ube4bQ9ES00 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.76■□□□□ 0.91
Ube4bQ9ES00 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ube4bQ9ES00 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ube4bQ9ES00 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ube4bQ9ES00 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ube4bQ9ES00 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ube4bQ9ES00 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ube4bQ9ES00 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ube4bQ9ES00 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ube4bQ9ES00 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.74■□□□□ 0.91
Ube4bQ9ES00 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ube4bQ9ES00 Iqck-206ENSMUST00000208658 2891 ntBASIC20.74■□□□□ 0.91
Ube4bQ9ES00 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ube4bQ9ES00 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ube4bQ9ES00 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ube4bQ9ES00 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ube4bQ9ES00 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ube4bQ9ES00 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ube4bQ9ES00 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ube4bQ9ES00 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ube4bQ9ES00 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ube4bQ9ES00 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ube4bQ9ES00 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.73■□□□□ 0.91
Ube4bQ9ES00 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Ube4bQ9ES00 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ube4bQ9ES00 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ube4bQ9ES00 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Ube4bQ9ES00 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Ube4bQ9ES00 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ube4bQ9ES00 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ube4bQ9ES00 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Ube4bQ9ES00 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.72■□□□□ 0.91
Ube4bQ9ES00 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ube4bQ9ES00 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ube4bQ9ES00 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ube4bQ9ES00 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ube4bQ9ES00 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Ube4bQ9ES00 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Ube4bQ9ES00 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ube4bQ9ES00 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ube4bQ9ES00 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ube4bQ9ES00 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Ube4bQ9ES00 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ube4bQ9ES00 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
Ube4bQ9ES00 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ube4bQ9ES00 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.69■□□□□ 0.9
Ube4bQ9ES00 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ube4bQ9ES00 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.69■□□□□ 0.9
Ube4bQ9ES00 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ube4bQ9ES00 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ube4bQ9ES00 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ube4bQ9ES00 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.69■□□□□ 0.9
Ube4bQ9ES00 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ube4bQ9ES00 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ube4bQ9ES00 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ube4bQ9ES00 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.68■□□□□ 0.9
Ube4bQ9ES00 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ube4bQ9ES00 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ube4bQ9ES00 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Ube4bQ9ES00 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ube4bQ9ES00 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Ube4bQ9ES00 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ube4bQ9ES00 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ube4bQ9ES00 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.67■□□□□ 0.9
Ube4bQ9ES00 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ube4bQ9ES00 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.67■□□□□ 0.9
Ube4bQ9ES00 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
Ube4bQ9ES00 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Ube4bQ9ES00 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ube4bQ9ES00 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 94.6 ms