Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
Rc3h1Q4VGL6 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
Rc3h1Q4VGL6 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
Rc3h1Q4VGL6 AC093043.1-201ENSMUST00000226700 898 ntBASIC25.4■■□□□ 1.66
Rc3h1Q4VGL6 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rc3h1Q4VGL6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rc3h1Q4VGL6 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Rc3h1Q4VGL6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC25.39■■□□□ 1.66
Rc3h1Q4VGL6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Rc3h1Q4VGL6 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC25.39■■□□□ 1.66
Rc3h1Q4VGL6 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Rc3h1Q4VGL6 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Rc3h1Q4VGL6 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC25.38■■□□□ 1.65
Rc3h1Q4VGL6 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
Rc3h1Q4VGL6 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Rc3h1Q4VGL6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
Rc3h1Q4VGL6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rc3h1Q4VGL6 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rc3h1Q4VGL6 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC25.37■■□□□ 1.65
Rc3h1Q4VGL6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC25.37■■□□□ 1.65
Rc3h1Q4VGL6 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rc3h1Q4VGL6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rc3h1Q4VGL6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Rc3h1Q4VGL6 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
Rc3h1Q4VGL6 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC25.36■■□□□ 1.65
Rc3h1Q4VGL6 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
Rc3h1Q4VGL6 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Rc3h1Q4VGL6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
Rc3h1Q4VGL6 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Rc3h1Q4VGL6 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Rc3h1Q4VGL6 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
Rc3h1Q4VGL6 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Rc3h1Q4VGL6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Rc3h1Q4VGL6 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Rc3h1Q4VGL6 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Rc3h1Q4VGL6 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Rc3h1Q4VGL6 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
Rc3h1Q4VGL6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC25.35■■□□□ 1.65
Rc3h1Q4VGL6 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC25.34■■□□□ 1.65
Rc3h1Q4VGL6 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Rc3h1Q4VGL6 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Rc3h1Q4VGL6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
Rc3h1Q4VGL6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
Rc3h1Q4VGL6 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Rc3h1Q4VGL6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Rc3h1Q4VGL6 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
Rc3h1Q4VGL6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Rc3h1Q4VGL6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
Rc3h1Q4VGL6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rc3h1Q4VGL6 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
Rc3h1Q4VGL6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Rc3h1Q4VGL6 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rc3h1Q4VGL6 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rc3h1Q4VGL6 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rc3h1Q4VGL6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rc3h1Q4VGL6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rc3h1Q4VGL6 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC25.31■■□□□ 1.64
Rc3h1Q4VGL6 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Rc3h1Q4VGL6 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Rc3h1Q4VGL6 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
Rc3h1Q4VGL6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Rc3h1Q4VGL6 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Rc3h1Q4VGL6 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Rc3h1Q4VGL6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Rc3h1Q4VGL6 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Rc3h1Q4VGL6 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Rc3h1Q4VGL6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rc3h1Q4VGL6 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rc3h1Q4VGL6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC25.29■■□□□ 1.64
Rc3h1Q4VGL6 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Rc3h1Q4VGL6 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Rc3h1Q4VGL6 Nsd1-206ENSMUST00000224918 1001 ntBASIC25.28■■□□□ 1.64
Rc3h1Q4VGL6 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
Rc3h1Q4VGL6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC25.27■■□□□ 1.64
Rc3h1Q4VGL6 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Rc3h1Q4VGL6 H3f3aos-201ENSMUST00000097448 2905 ntBASIC25.26■■□□□ 1.63
Rc3h1Q4VGL6 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Rc3h1Q4VGL6 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
Rc3h1Q4VGL6 Gm22567-201ENSMUST00000175542 342 ntBASIC25.26■■□□□ 1.63
Rc3h1Q4VGL6 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Rc3h1Q4VGL6 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Rc3h1Q4VGL6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Rc3h1Q4VGL6 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Rc3h1Q4VGL6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Rc3h1Q4VGL6 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Rc3h1Q4VGL6 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Rc3h1Q4VGL6 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
Rc3h1Q4VGL6 Gm18755-201ENSMUST00000218030 1099 ntBASIC25.25■■□□□ 1.63
Rc3h1Q4VGL6 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC25.25■■□□□ 1.63
Rc3h1Q4VGL6 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Rc3h1Q4VGL6 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Rc3h1Q4VGL6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
Rc3h1Q4VGL6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Rc3h1Q4VGL6 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Rc3h1Q4VGL6 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC25.24■■□□□ 1.63
Rc3h1Q4VGL6 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Rc3h1Q4VGL6 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Rc3h1Q4VGL6 Gm42501-201ENSMUST00000200220 1026 ntBASIC25.24■■□□□ 1.63
Rc3h1Q4VGL6 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Rc3h1Q4VGL6 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms