Protein–RNA interactions for Protein: Q04214

TY1B-MR1, Transposon Ty1-MR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-MR1Q04214 YPR202WYPR202W 717 nt8.97□□□□□ -0.97
TY1B-MR1Q04214 GUD1YDL238C 1470 nt8.97□□□□□ -0.97
TY1B-MR1Q04214 RPL5YPL131W 894 nt8.96□□□□□ -0.97
TY1B-MR1Q04214 SOG2YOR353C 2376 nt8.96□□□□□ -0.97
TY1B-MR1Q04214 GSH1YJL101C 2037 nt8.96□□□□□ -0.98
TY1B-MR1Q04214 MLC1YGL106W 450 nt8.96□□□□□ -0.98
TY1B-MR1Q04214 GIT1YCR098C 1557 nt8.95□□□□□ -0.98
TY1B-MR1Q04214 AMD1YML035C 2433 nt8.95□□□□□ -0.98
TY1B-MR1Q04214 ATG33YLR356W 594 nt8.95□□□□□ -0.98
TY1B-MR1Q04214 GPH1YPR160W 2709 nt8.95□□□□□ -0.98
TY1B-MR1Q04214 THI2YBR240C 1353 nt8.94□□□□□ -0.98
TY1B-MR1Q04214 PAN6YIL145C 930 nt8.94□□□□□ -0.98
TY1B-MR1Q04214 YDR109CYDR109C 2148 nt8.93□□□□□ -0.98
TY1B-MR1Q04214 YPL062WYPL062W 405 nt8.93□□□□□ -0.98
TY1B-MR1Q04214 CYB2YML054C 1776 nt8.93□□□□□ -0.98
TY1B-MR1Q04214 YGR182CYGR182C 354 nt8.92□□□□□ -0.98
TY1B-MR1Q04214 LEU5YHR002W 1074 nt8.92□□□□□ -0.98
TY1B-MR1Q04214 ORC5YNL261W 1440 nt8.92□□□□□ -0.98
TY1B-MR1Q04214 YCL041CYCL041C 495 nt8.91□□□□□ -0.98
TY1B-MR1Q04214 MTC1YJL123C 1437 nt8.9□□□□□ -0.98
TY1B-MR1Q04214 YHR070C-AYHR070C-A 411 nt8.9□□□□□ -0.98
TY1B-MR1Q04214 QCR8YJL166W 285 nt8.9□□□□□ -0.98
TY1B-MR1Q04214 BDF2YDL070W 1917 nt8.89□□□□□ -0.99
TY1B-MR1Q04214 YCR097W-AYCR097W-A 267 nt8.89□□□□□ -0.99
TY1B-MR1Q04214 BNA3YJL060W 1335 nt8.88□□□□□ -0.99
TY1B-MR1Q04214 RTG2YGL252C 1767 nt8.88□□□□□ -0.99
TY1B-MR1Q04214 GTT3YEL017W 1014 nt8.87□□□□□ -0.99
TY1B-MR1Q04214 PAC10YGR078C 600 nt8.87□□□□□ -0.99
TY1B-MR1Q04214 OPI8YKR035C 642 nt8.87□□□□□ -0.99
TY1B-MR1Q04214 YEL053W-AYEL053W-A 348 nt8.86□□□□□ -0.99
TY1B-MR1Q04214 YNR042WYNR042W 429 nt8.86□□□□□ -0.99
TY1B-MR1Q04214 PMT3YOR321W 2262 nt8.85□□□□□ -0.99
TY1B-MR1Q04214 DJP1YIR004W 1299 nt8.85□□□□□ -0.99
TY1B-MR1Q04214 XBP1YIL101C 1944 nt8.84□□□□□ -0.99
TY1B-MR1Q04214 ITR1YDR497C 1755 nt8.84□□□□□ -0.99
TY1B-MR1Q04214 SHM1YBR263W 1473 nt8.84□□□□□ -1
TY1B-MR1Q04214 PRO3YER023W 861 nt8.84□□□□□ -1
TY1B-MR1Q04214 BBP1YPL255W 1158 nt8.84□□□□□ -1
TY1B-MR1Q04214 QNS1YHR074W 2145 nt8.83□□□□□ -1
TY1B-MR1Q04214 VPS61YDR136C 573 nt8.83□□□□□ -1
TY1B-MR1Q04214 YGL194C-AYGL194C-A 243 nt8.83□□□□□ -1
TY1B-MR1Q04214 YGR176WYGR176W 348 nt8.83□□□□□ -1
TY1B-MR1Q04214 PGM1YKL127W 1713 nt8.82□□□□□ -1
TY1B-MR1Q04214 YDL034WYDL034W 345 nt8.82□□□□□ -1
TY1B-MR1Q04214 DPH5YLR172C 903 nt8.82□□□□□ -1
TY1B-MR1Q04214 YHM2YMR241W 945 nt8.82□□□□□ -1
TY1B-MR1Q04214 YMR253CYMR253C 1245 nt8.82□□□□□ -1
TY1B-MR1Q04214 YMC1YPR058W 924 nt8.82□□□□□ -1
TY1B-MR1Q04214 HSX1tR(CCU)J 72 nt8.81□□□□□ -1
TY1B-MR1Q04214 KKQ8YKL168C 2175 nt8.81□□□□□ -1
TY1B-MR1Q04214 ATO3YDR384C 828 nt8.81□□□□□ -1
TY1B-MR1Q04214 PGU1YJR153W 1086 nt8.8□□□□□ -1
TY1B-MR1Q04214 CSG2YBR036C 1233 nt8.8□□□□□ -1
TY1B-MR1Q04214 YCR075W-AYCR075W-A 228 nt8.78□□□□□ -1
TY1B-MR1Q04214 IPI1YHR085W 1005 nt8.78□□□□□ -1
TY1B-MR1Q04214 NTG1YAL015C 1200 nt8.78□□□□□ -1
TY1B-MR1Q04214 ATP14YLR295C 375 nt8.78□□□□□ -1
TY1B-MR1Q04214 YAP1801YHR161C 1914 nt8.78□□□□□ -1
TY1B-MR1Q04214 SLO1YER180C-A 258 nt8.78□□□□□ -1
TY1B-MR1Q04214 YBR144CYBR144C 315 nt8.78□□□□□ -1
TY1B-MR1Q04214 YDR154CYDR154C 351 nt8.77□□□□□ -1.01
TY1B-MR1Q04214 DAL82YNL314W 768 nt8.77□□□□□ -1.01
TY1B-MR1Q04214 YBR124WYBR124W 360 nt8.76□□□□□ -1.01
TY1B-MR1Q04214 APS3YJL024C 585 nt8.76□□□□□ -1.01
TY1B-MR1Q04214 PRM10YJL108C 1152 nt8.76□□□□□ -1.01
TY1B-MR1Q04214 YKL151CYKL151C 1014 nt8.76□□□□□ -1.01
TY1B-MR1Q04214 YCL065WYCL065W 369 nt8.75□□□□□ -1.01
TY1B-MR1Q04214 GIR2YDR152W 798 nt8.75□□□□□ -1.01
TY1B-MR1Q04214 CAD1YDR423C 1230 nt8.75□□□□□ -1.01
TY1B-MR1Q04214 TIM54YJL054W 1437 nt8.75□□□□□ -1.01
TY1B-MR1Q04214 RTT106YNL206C 1368 nt8.75□□□□□ -1.01
TY1B-MR1Q04214 SUF5tG(CCC)O 72 nt8.74□□□□□ -1.01
TY1B-MR1Q04214 NOB1YOR056C 1380 nt8.74□□□□□ -1.01
TY1B-MR1Q04214 ECM27YJR106W 2178 nt8.73□□□□□ -1.01
TY1B-MR1Q04214 ALR1YOL130W 2580 nt8.73□□□□□ -1.01
TY1B-MR1Q04214 NDC1YML031W 1968 nt8.73□□□□□ -1.01
TY1B-MR1Q04214 YLR173WYLR173W 1827 nt8.73□□□□□ -1.01
TY1B-MR1Q04214 YRF1-2YER190W 5046 nt8.72□□□□□ -1.01
TY1B-MR1Q04214 YLL059CYLL059C 507 nt8.72□□□□□ -1.01
TY1B-MR1Q04214 GAT3YLR013W 426 nt8.72□□□□□ -1.01
TY1B-MR1Q04214 EFM1YHL039W 1758 nt8.72□□□□□ -1.01
TY1B-MR1Q04214 YJR115WYJR115W 510 nt8.71□□□□□ -1.01
TY1B-MR1Q04214 POB3YML069W 1659 nt8.71□□□□□ -1.02
TY1B-MR1Q04214 RPT6YGL048C 1218 nt8.71□□□□□ -1.02
TY1B-MR1Q04214 SAM4YPL273W 978 nt8.71□□□□□ -1.02
TY1B-MR1Q04214 AGP2YBR132C 1791 nt8.7□□□□□ -1.02
TY1B-MR1Q04214 GYP8YFL027C 1494 nt8.7□□□□□ -1.02
TY1B-MR1Q04214 VRP1YLR337C 2454 nt8.69□□□□□ -1.02
TY1B-MR1Q04214 ECM15YBL001C 315 nt8.68□□□□□ -1.02
TY1B-MR1Q04214 LPD1YFL018C 1500 nt8.68□□□□□ -1.02
TY1B-MR1Q04214 HIS7YBR248C 1659 nt8.68□□□□□ -1.02
TY1B-MR1Q04214 COX9YDL067C 180 nt8.68□□□□□ -1.02
TY1B-MR1Q04214 CWC21YDR482C 408 nt8.68□□□□□ -1.02
TY1B-MR1Q04214 GLN1YPR035W 1113 nt8.68□□□□□ -1.02
TY1B-MR1Q04214 TEP1YNL128W 1305 nt8.67□□□□□ -1.02
TY1B-MR1Q04214 CIS3YJL158C 684 nt8.67□□□□□ -1.02
TY1B-MR1Q04214 PET112YBL080C 1626 nt8.67□□□□□ -1.02
TY1B-MR1Q04214 HHY1YEL059W 309 nt8.66□□□□□ -1.02
TY1B-MR1Q04214 YER010CYER010C 705 nt8.66□□□□□ -1.02
TY1B-MR1Q04214 tN(GUU)CtN(GUU)C 74 nt8.66□□□□□ -1.02
Retrieved 100 of 7,029 protein–RNA pairs in 19.9 ms